Clostridium butyricum 5521

J. Craig Venter Institute

GC Content: 28.8%, Released Date: July 11, 2007 #17942

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABDT01000001
14.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ABDT01000002
2.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000003
15.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ABDT01000004
45.5 KB
46 CDS

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whole genome shotgun sequence
NZ_ABDT01000005
31.8 KB
27 CDS

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whole genome shotgun sequence
NZ_ABDT01000006
19.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ABDT01000007
7.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ABDT01000008
37.1 KB
22 CDS

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whole genome shotgun sequence
NZ_ABDT01000009
9.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ABDT01000010
11.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ABDT01000011
3.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000012
3.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000013
2.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDT01000014
24.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABDT01000015
9.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ABDT01000016
41.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ABDT01000017
40.9 KB
37 CDS

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whole genome shotgun sequence
NZ_ABDT01000018
9.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ABDT01000019
33.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ABDT01000020
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDT01000021
98.1 KB
84 CDS

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whole genome shotgun sequence
NZ_ABDT01000022
12.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDT01000023
79.5 KB
70 CDS

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whole genome shotgun sequence
NZ_ABDT01000024
56.5 KB
50 CDS

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whole genome shotgun sequence
NZ_ABDT01000025
33.3 KB
27 CDS

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whole genome shotgun sequence
NZ_ABDT01000026
53.0 KB
59 CDS

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whole genome shotgun sequence
NZ_ABDT01000027
14.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ABDT01000028
79.1 KB
74 CDS

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whole genome shotgun sequence
NZ_ABDT01000029
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDT01000030
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000031
39.1 KB
35 CDS

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whole genome shotgun sequence
NZ_ABDT01000032
1014 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDT01000033
9.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ABDT01000034
3.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000035
23.8 KB
22 CDS

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whole genome shotgun sequence
NZ_ABDT01000036
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000037
23.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ABDT01000038
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000039
7.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ABDT01000040
4.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABDT01000041
35.1 KB
32 CDS

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whole genome shotgun sequence
NZ_ABDT01000042
2.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000043
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000044
40.9 KB
40 CDS

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whole genome shotgun sequence
NZ_ABDT01000045
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000046
5.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDT01000047
35.1 KB
19 CDS

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whole genome shotgun sequence
NZ_ABDT01000048
22.2 KB
20 CDS

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whole genome shotgun sequence
NZ_ABDT01000049
136.5 KB
123 CDS

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whole genome shotgun sequence
NZ_ABDT01000050
37.9 KB
31 CDS

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whole genome shotgun sequence
NZ_ABDT01000051
31.7 KB
25 CDS

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whole genome shotgun sequence
NZ_ABDT01000052
20.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ABDT01000053
174.4 KB
184 CDS

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whole genome shotgun sequence
NZ_ABDT01000054
59.3 KB
75 CDS

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whole genome shotgun sequence
NZ_ABDT01000055
4.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000056
98.5 KB
75 CDS

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whole genome shotgun sequence
NZ_ABDT01000057
59.4 KB
61 CDS

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whole genome shotgun sequence
NZ_ABDT01000058
53.8 KB
53 CDS

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whole genome shotgun sequence
NZ_ABDT01000059
41.7 KB
31 CDS

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whole genome shotgun sequence
NZ_ABDT01000060
923 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000061
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000062
148.2 KB
114 CDS

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whole genome shotgun sequence
NZ_ABDT01000063
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDT01000064
8.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ABDT01000065
65.9 KB
48 CDS

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whole genome shotgun sequence
NZ_ABDT01000066
225.5 KB
206 CDS

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whole genome shotgun sequence
NZ_ABDT01000067
15.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ABDT01000068
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000069
24.1 KB
20 CDS

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whole genome shotgun sequence
NZ_ABDT01000070
19.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ABDT01000071
11.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABDT01000072
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000073
49.9 KB
51 CDS

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whole genome shotgun sequence
NZ_ABDT01000074
24.6 KB
15 CDS

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whole genome shotgun sequence
NZ_ABDT01000075
252 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000076
63.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ABDT01000077
31.2 KB
29 CDS

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whole genome shotgun sequence
NZ_ABDT01000078
63.5 KB
52 CDS

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whole genome shotgun sequence
NZ_ABDT01000079
5.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ABDT01000080
9.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000081
28.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ABDT01000082
26.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ABDT01000083
19.0 KB
35 CDS

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whole genome shotgun sequence
NZ_ABDT01000084
7.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABDT01000085
3.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000086
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000087
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000088
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000089
8.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDT01000090
116.7 KB
137 CDS

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whole genome shotgun sequence
NZ_ABDT01000091
11.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABDT01000092
210.8 KB
175 CDS

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whole genome shotgun sequence
NZ_ABDT01000093
144.3 KB
138 CDS

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whole genome shotgun sequence
NZ_ABDT01000094
209.1 KB
169 CDS

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whole genome shotgun sequence
NZ_ABDT01000095
32.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ABDT01000096
14.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ABDT01000097
38.0 KB
39 CDS

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whole genome shotgun sequence
NZ_ABDT01000098
28.4 KB
25 CDS

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whole genome shotgun sequence
NZ_ABDT01000099
75.3 KB
52 CDS

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whole genome shotgun sequence
NZ_ABDT01000100
3.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDT01000101
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000102
11.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ABDT01000103
81.1 KB
61 CDS

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whole genome shotgun sequence
NZ_ABDT01000104
137.7 KB
126 CDS

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whole genome shotgun sequence
NZ_ABDT01000105
999 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000106
67.6 KB
49 CDS

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whole genome shotgun sequence
NZ_ABDT01000107
106.7 KB
67 CDS

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whole genome shotgun sequence
NZ_ABDT01000108
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000109
166.6 KB
143 CDS

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whole genome shotgun sequence
NZ_ABDT01000110
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000111
13.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ABDT01000112
79.2 KB
70 CDS

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whole genome shotgun sequence
NZ_ABDT01000113
33.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ABDT01000114
72.5 KB
68 CDS

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whole genome shotgun sequence
NZ_ABDT01000115
1009 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000116
34.4 KB
36 CDS

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whole genome shotgun sequence
NZ_ABDT01000117
2.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABDT01000118
3.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDT01000119
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000120
65.8 KB
61 CDS

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whole genome shotgun sequence
NZ_ABDT01000121
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDT01000122
16.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ABDT01000123
902 bytes
0 CDS

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Taxonomy

External Links

Clostridium butyricum 5521

Search Genome

Sequences

PubMed Search for Clostridium butyricum 5521

Related Genomes