Clostridium butyricum E4 str. BoNT E BL5262

J. Craig Venter Institute

Genome Size: 4.75 megabases, GC Content: 28.7%, Released Date: May 15, 2009 #17943

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACOM01000001
739.9 KB
649 CDS

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whole genome shotgun sequence
NZ_ACOM01000002
242.2 KB
206 CDS

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whole genome shotgun sequence
NZ_ACOM01000003
5.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOM01000004
736.6 KB
679 CDS

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whole genome shotgun sequence
NZ_ACOM01000005
2.1 MB
2170 CDS

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whole genome shotgun sequence
NZ_ACOM01000006
3.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOM01000007
347.6 KB
285 CDS

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whole genome shotgun sequence
NZ_ACOM01000008
27.7 KB
17 CDS

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whole genome shotgun sequence
NZ_ACOM01000009
156.4 KB
120 CDS

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whole genome shotgun sequence
NZ_ACOM01000010
13.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ACOM01000011
77.0 KB
74 CDS

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whole genome shotgun sequence
NZ_ACOM01000012
88.8 KB
84 CDS

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whole genome shotgun sequence
NZ_ACOM01000013
9.0 KB
9 CDS

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Taxonomy

External Links

Clostridium butyricum E4 str. BoNT E BL5262

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Sequences

PubMed Search for Clostridium butyricum E4 str. BoNT E BL5262

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