Clostridium carboxidivorans P7

Mississippi State University

Genome Size: 4.4 megabases, Released Date: May 10, 2010 #20218

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

CLCAR0010, whole genome shotgun sequence
ADEK01000001
176.5 KB
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CLCAR0012, whole genome shotgun sequence
ADEK01000002
142.5 KB
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CLCAR0014, whole genome shotgun sequence
ADEK01000003
19.8 KB
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CLCAR0016, whole genome shotgun sequence
ADEK01000004
99.7 KB
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CLCAR0018, whole genome shotgun sequence
ADEK01000005
275.3 KB
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CLCAR0020, whole genome shotgun sequence
ADEK01000006
112.0 KB
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CLCAR0022, whole genome shotgun sequence
ADEK01000007
185.4 KB
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CLCAR0024, whole genome shotgun sequence
ADEK01000008
27.7 KB
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CLCAR0026, whole genome shotgun sequence
ADEK01000009
55.4 KB
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CLCAR0028, whole genome shotgun sequence
ADEK01000010
2.0 KB
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CLCAR0030, whole genome shotgun sequence
ADEK01000011
16.2 KB
0 CDS

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CLCAR0032, whole genome shotgun sequence
ADEK01000012
2.5 KB
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CLCAR0034, whole genome shotgun sequence
ADEK01000013
89.0 KB
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CLCAR0036, whole genome shotgun sequence
ADEK01000014
10.8 KB
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CLCAR0038, whole genome shotgun sequence
ADEK01000015
109.1 KB
0 CDS

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CLCAR0040, whole genome shotgun sequence
ADEK01000016
49.0 KB
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CLCAR0042, whole genome shotgun sequence
ADEK01000017
2.5 KB
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CLCAR0044, whole genome shotgun sequence
ADEK01000018
281.6 KB
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CLCAR0046, whole genome shotgun sequence
ADEK01000019
81.8 KB
0 CDS

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CLCAR0048, whole genome shotgun sequence
ADEK01000020
53.2 KB
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CLCAR0050, whole genome shotgun sequence
ADEK01000021
81.3 KB
0 CDS

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CLCAR0052, whole genome shotgun sequence
ADEK01000022
208.5 KB
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CLCAR0054, whole genome shotgun sequence
ADEK01000023
71.5 KB
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CLCAR0056, whole genome shotgun sequence
ADEK01000024
84.8 KB
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CLCAR0058, whole genome shotgun sequence
ADEK01000025
8.4 KB
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CLCAR0060, whole genome shotgun sequence
ADEK01000026
134.3 KB
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CLCAR0062, whole genome shotgun sequence
ADEK01000027
42.4 KB
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CLCAR0064, whole genome shotgun sequence
ADEK01000028
22.2 KB
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CLCAR0066, whole genome shotgun sequence
ADEK01000029
10.3 KB
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CLCAR0068, whole genome shotgun sequence
ADEK01000030
57.8 KB
0 CDS

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CLCAR0070, whole genome shotgun sequence
ADEK01000031
15.1 KB
0 CDS

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CLCAR0072, whole genome shotgun sequence
ADEK01000032
87.5 KB
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CLCAR0074, whole genome shotgun sequence
ADEK01000033
51.5 KB
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CLCAR0076, whole genome shotgun sequence
ADEK01000034
4.6 KB
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CLCAR0078, whole genome shotgun sequence
ADEK01000035
20.3 KB
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CLCAR0080, whole genome shotgun sequence
ADEK01000036
19.7 KB
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CLCAR0082, whole genome shotgun sequence
ADEK01000037
14.5 KB
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CLCAR0084, whole genome shotgun sequence
ADEK01000038
25.9 KB
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CLCAR0086, whole genome shotgun sequence
ADEK01000039
27.3 KB
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CLCAR0088, whole genome shotgun sequence
ADEK01000040
118.4 KB
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CLCAR0090, whole genome shotgun sequence
ADEK01000041
19.0 KB
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CLCAR0092, whole genome shotgun sequence
ADEK01000042
96.9 KB
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CLCAR0094, whole genome shotgun sequence
ADEK01000043
21.4 KB
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CLCAR0096, whole genome shotgun sequence
ADEK01000044
1.1 KB
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CLCAR0098, whole genome shotgun sequence
ADEK01000045
299.7 KB
0 CDS

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CLCAR0100, whole genome shotgun sequence
ADEK01000046
35.4 KB
0 CDS

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CLCAR0102, whole genome shotgun sequence
ADEK01000047
1.5 KB
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CLCAR0104, whole genome shotgun sequence
ADEK01000048
92.4 KB
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CLCAR0106, whole genome shotgun sequence
ADEK01000049
212.6 KB
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CLCAR0108, whole genome shotgun sequence
ADEK01000050
37.9 KB
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CLCAR0110, whole genome shotgun sequence
ADEK01000051
111.5 KB
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CLCAR0112, whole genome shotgun sequence
ADEK01000052
29.6 KB
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CLCAR0114, whole genome shotgun sequence
ADEK01000053
37.8 KB
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CLCAR0116, whole genome shotgun sequence
ADEK01000054
13.4 KB
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CLCAR0118, whole genome shotgun sequence
ADEK01000055
1.3 KB
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CLCAR0120, whole genome shotgun sequence
ADEK01000056
735 bytes
0 CDS

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CLCAR0122, whole genome shotgun sequence
ADEK01000057
635 bytes
0 CDS

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CLCAR0124, whole genome shotgun sequence
ADEK01000058
681 bytes
0 CDS

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CLCAR0126, whole genome shotgun sequence
ADEK01000059
120.6 KB
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CLCAR0128, whole genome shotgun sequence
ADEK01000060
192.8 KB
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CLCAR0130, whole genome shotgun sequence
ADEK01000061
36.0 KB
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CLCAR0132, whole genome shotgun sequence
ADEK01000062
4.4 KB
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CLCAR0134, whole genome shotgun sequence
ADEK01000063
1.9 KB
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CLCAR0136, whole genome shotgun sequence
ADEK01000064
1.1 KB
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CLCAR0138, whole genome shotgun sequence
ADEK01000065
6.2 KB
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CLCAR0140, whole genome shotgun sequence
ADEK01000066
983 bytes
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CLCAR0142, whole genome shotgun sequence
ADEK01000067
15.2 KB
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CLCAR0144, whole genome shotgun sequence
ADEK01000068
3.7 KB
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CLCAR0146, whole genome shotgun sequence
ADEK01000069
6.5 KB
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References

Genome sequence of the solvent-producing bacterium Clostridium carboxidivorans strain P7T
Paul,D., Austin,F.W., Arick,T., Bridges,S.M., Burgess,S.C., Dandass,Y.S. and Lawrence,M.L. J. Bacteriol. 192 (20), 5554-5555 (2010)
PubMed, PubGet, HubMed

Taxonomy

External Links

Clostridium carboxidivorans P7

Search Genome

Sequences

References

Related Genomes