Clostridium leptum DSM 753

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 50.2%, Released Date: July 13, 2007 #17958

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCB02000001
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCB02000002
5.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCB02000003
7.0 KB
9 CDS

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whole genome shotgun sequence
NZ_ABCB02000004
19.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ABCB02000005
26.1 KB
30 CDS

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whole genome shotgun sequence
NZ_ABCB02000006
33.2 KB
46 CDS

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whole genome shotgun sequence
NZ_ABCB02000007
39.2 KB
47 CDS

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whole genome shotgun sequence
NZ_ABCB02000008
12.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ABCB02000009
46.7 KB
56 CDS

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whole genome shotgun sequence
NZ_ABCB02000010
26.8 KB
23 CDS

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whole genome shotgun sequence
NZ_ABCB02000011
56.7 KB
78 CDS

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whole genome shotgun sequence
NZ_ABCB02000012
88.0 KB
115 CDS

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whole genome shotgun sequence
NZ_ABCB02000013
96.8 KB
110 CDS

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whole genome shotgun sequence
NZ_ABCB02000014
164.7 KB
197 CDS

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whole genome shotgun sequence
NZ_ABCB02000015
97.0 KB
97 CDS

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whole genome shotgun sequence
NZ_ABCB02000016
260.3 KB
342 CDS

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whole genome shotgun sequence
NZ_ABCB02000017
217.6 KB
300 CDS

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whole genome shotgun sequence
NZ_ABCB02000018
442.0 KB
584 CDS

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whole genome shotgun sequence
NZ_ABCB02000019
487.0 KB
612 CDS

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whole genome shotgun sequence
NZ_ABCB02000020
551.7 KB
591 CDS

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whole genome shotgun sequence
NZ_ABCB02000021
511.4 KB
628 CDS

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whole genome shotgun sequence
NZ_ABCB02000022
3.4 KB
8 CDS

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Taxonomy

External Links

Clostridium leptum DSM 753

Search Genome

Sequences

PubMed Search for Clostridium leptum DSM 753

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