Clostridium methylpentosum DSM 5476

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 51.8%, Released Date: Feb. 4, 2009 #17959

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACEC01000001
3.7 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000002
52.5 KB
70 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000003
18.1 KB
25 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000004
13.3 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000005
2.1 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000006
8.5 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000007
31.6 KB
36 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000008
29.0 KB
47 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000009
15.9 KB
23 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000010
32.1 KB
39 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000011
6.9 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000012
14.5 KB
20 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000013
5.3 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000014
6.2 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000015
2.6 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000016
22.6 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000017
12.2 KB
17 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000018
17.9 KB
22 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000019
41.7 KB
51 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000020
55.1 KB
69 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000021
68.6 KB
76 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000022
1.6 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000023
6.9 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000024
3.8 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000025
39.8 KB
48 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000026
83.0 KB
88 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000027
4.7 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000028
3.8 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000029
6.3 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000030
14.0 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000031
28.8 KB
41 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000032
71.1 KB
54 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000033
21.0 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000034
22.1 KB
22 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000035
62.2 KB
77 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000036
11.4 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000037
10.0 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000038
3.7 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000039
14.0 KB
19 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000040
48.0 KB
75 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000041
50.2 KB
69 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000042
18.4 KB
21 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000043
33.3 KB
47 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000044
15.6 KB
17 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000045
104.0 KB
126 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000046
36.6 KB
45 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000047
37.9 KB
44 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000048
6.9 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000049
3.6 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000050
14.7 KB
18 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000051
6.6 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000052
60.9 KB
67 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000053
5.5 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000054
6.7 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000055
5.0 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000056
10.9 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000057
56.1 KB
65 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000058
55.5 KB
77 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000059
5.3 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000060
52.7 KB
60 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000061
58.2 KB
67 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000062
41.9 KB
33 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000063
3.8 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000064
32.6 KB
42 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000065
12.9 KB
18 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000066
129.6 KB
131 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000067
52.1 KB
69 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000068
27.6 KB
31 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000069
4.6 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000070
19.7 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000071
6.8 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000072
511 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000073
6.0 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000074
16.0 KB
18 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000075
5.9 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000076
6.6 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000077
61.8 KB
66 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000078
9.3 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000079
18.8 KB
23 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000080
2.1 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000081
7.8 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000082
54.1 KB
61 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000083
4.4 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000084
13.0 KB
22 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000085
7.0 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000086
10.5 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000087
6.6 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000088
17.0 KB
24 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000089
1.3 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000090
3.8 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000091
28.2 KB
44 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000092
5.5 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000093
105.1 KB
128 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000094
25.4 KB
40 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000095
41.2 KB
50 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000096
11.7 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000097
11.6 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000098
19.0 KB
24 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000099
7.7 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000100
3.3 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000101
14.7 KB
16 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000102
52.7 KB
39 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000103
44.2 KB
34 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000104
26.1 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000105
8.9 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000106
2.6 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000107
1.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000108
25.6 KB
28 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000109
14.3 KB
21 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000110
3.3 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000111
11.3 KB
16 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000112
5.5 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000113
26.7 KB
38 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000114
6.7 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000115
128.5 KB
163 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000116
13.3 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000117
5.5 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000118
30.5 KB
37 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000119
34.2 KB
51 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000120
2.7 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000121
3.7 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000122
33.0 KB
47 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000123
22.4 KB
29 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000124
60.2 KB
59 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000125
20.4 KB
31 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000126
90.8 KB
91 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000127
11.2 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000128
30.3 KB
33 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000129
24.9 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000130
41.1 KB
50 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000131
5.5 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000132
4.7 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000133
1.4 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000134
8.2 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000135
1.3 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000136
96.2 KB
110 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000137
1.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000138
525 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000139
1.2 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000140
505 bytes
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000141
1008 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000142
1.8 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000143
1.2 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000144
563 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000145
523 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACEC01000146
502 bytes
1 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Clostridium methylpentosum DSM 5476

Search Genome

Sequences

PubMed Search for Clostridium methylpentosum DSM 5476

Related Genomes