Clostridium sp. HGF2

J. Craig Venter Institute

Released Date: Nov. 30, 2010 #20227

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00036, whole genome shotgun sequence
NZ_AENW01000001
40.0 KB
124 CDS

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contig00035, whole genome shotgun sequence
NZ_AENW01000002
138.3 KB
286 CDS

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contig00023, whole genome shotgun sequence
NZ_AENW01000003
193.9 KB
412 CDS

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contig00007, whole genome shotgun sequence
NZ_AENW01000004
192.1 KB
420 CDS

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contig00028, whole genome shotgun sequence
NZ_AENW01000005
192.5 KB
410 CDS

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contig00018, whole genome shotgun sequence
NZ_AENW01000006
54.9 KB
112 CDS

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contig00002, whole genome shotgun sequence
NZ_AENW01000007
183.8 KB
372 CDS

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contig00001, whole genome shotgun sequence
NZ_AENW01000008
76.9 KB
152 CDS

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contig00019, whole genome shotgun sequence
NZ_AENW01000009
300.0 KB
608 CDS

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contig00033, whole genome shotgun sequence
NZ_AENW01000010
1014 bytes
4 CDS

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contig00017, whole genome shotgun sequence
NZ_AENW01000011
174.0 KB
372 CDS

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contig00051, whole genome shotgun sequence
NZ_AENW01000012
114.8 KB
228 CDS

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contig00073, whole genome shotgun sequence
NZ_AENW01000013
2.9 KB
4 CDS

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contig00030, whole genome shotgun sequence
NZ_AENW01000014
2.3 KB
6 CDS

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contig00027, whole genome shotgun sequence
NZ_AENW01000015
18.2 KB
40 CDS

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contig00031, whole genome shotgun sequence
NZ_AENW01000016
5.5 KB
16 CDS

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contig00076, whole genome shotgun sequence
NZ_AENW01000017
1.1 KB
2 CDS

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contig00047, whole genome shotgun sequence
NZ_AENW01000018
1.6 KB
2 CDS

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contig00022, whole genome shotgun sequence
NZ_AENW01000019
167.0 KB
370 CDS

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contig00014, whole genome shotgun sequence
NZ_AENW01000020
17.7 KB
38 CDS

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contig00080, whole genome shotgun sequence
NZ_AENW01000021
26.8 KB
64 CDS

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contig00062, whole genome shotgun sequence
NZ_AENW01000022
4.9 KB
0 CDS

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contig00026, whole genome shotgun sequence
NZ_AENW01000023
13.2 KB
22 CDS

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contig00010, whole genome shotgun sequence
NZ_AENW01000024
1.4 KB
4 CDS

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contig00034, whole genome shotgun sequence
NZ_AENW01000025
5.5 KB
10 CDS

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contig00038, whole genome shotgun sequence
NZ_AENW01000026
39.6 KB
78 CDS

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contig00011, whole genome shotgun sequence
NZ_AENW01000027
2.5 KB
4 CDS

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contig00067, whole genome shotgun sequence
NZ_AENW01000028
16.5 KB
30 CDS

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contig00058, whole genome shotgun sequence
NZ_AENW01000029
1.8 KB
2 CDS

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contig00049, whole genome shotgun sequence
NZ_AENW01000030
62.9 KB
120 CDS

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contig00024, whole genome shotgun sequence
NZ_AENW01000031
1.9 KB
2 CDS

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contig00054, whole genome shotgun sequence
NZ_AENW01000032
1.2 KB
2 CDS

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contig00013, whole genome shotgun sequence
NZ_AENW01000033
34.1 KB
74 CDS

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contig00025, whole genome shotgun sequence
NZ_AENW01000034
8.0 KB
16 CDS

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contig00032, whole genome shotgun sequence
NZ_AENW01000035
57.3 KB
126 CDS

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contig00006, whole genome shotgun sequence
NZ_AENW01000036
92.8 KB
200 CDS

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contig00063, whole genome shotgun sequence
NZ_AENW01000037
73.5 KB
158 CDS

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contig00045, whole genome shotgun sequence
NZ_AENW01000038
33.1 KB
82 CDS

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contig00039, whole genome shotgun sequence
NZ_AENW01000039
8.9 KB
12 CDS

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contig00003, whole genome shotgun sequence
NZ_AENW01000040
6.4 KB
14 CDS

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contig00064, whole genome shotgun sequence
NZ_AENW01000041
663 bytes
2 CDS

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contig00009, whole genome shotgun sequence
NZ_AENW01000042
947 bytes
2 CDS

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contig00078, whole genome shotgun sequence
NZ_AENW01000043
283.1 KB
578 CDS

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contig00048, whole genome shotgun sequence
NZ_AENW01000044
15.5 KB
32 CDS

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contig00012, whole genome shotgun sequence
NZ_AENW01000045
1.4 KB
6 CDS

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contig00057, whole genome shotgun sequence
NZ_AENW01000046
217.1 KB
460 CDS

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contig00015, whole genome shotgun sequence
NZ_AENW01000047
15.3 KB
32 CDS

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contig00066, whole genome shotgun sequence
NZ_AENW01000048
869 bytes
2 CDS

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contig00044, whole genome shotgun sequence
NZ_AENW01000049
24.7 KB
46 CDS

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contig00008, whole genome shotgun sequence
NZ_AENW01000050
30.5 KB
50 CDS

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contig00084, whole genome shotgun sequence
NZ_AENW01000051
772 bytes
0 CDS

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contig00004, whole genome shotgun sequence
NZ_AENW01000052
120.9 KB
262 CDS

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contig00037, whole genome shotgun sequence
NZ_AENW01000053
314.9 KB
708 CDS

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contig00075, whole genome shotgun sequence
NZ_AENW01000054
36.4 KB
72 CDS

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contig00053, whole genome shotgun sequence
NZ_AENW01000055
3.6 KB
2 CDS

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contig00041, whole genome shotgun sequence
NZ_AENW01000056
201.9 KB
416 CDS

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contig00050, whole genome shotgun sequence
NZ_AENW01000057
504 bytes
2 CDS

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contig00020, whole genome shotgun sequence
NZ_AENW01000058
240.0 KB
496 CDS

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contig00070, whole genome shotgun sequence
NZ_AENW01000059
108.6 KB
200 CDS

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contig00005, whole genome shotgun sequence
NZ_AENW01000060
15.4 KB
36 CDS

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Taxonomy

External Links

Clostridium sp. HGF2

Search Genome

Sequences

PubMed Search for Clostridium sp. HGF2

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