Clostridium sp. L2-50

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 41.4%, Released Date: May 24, 2007 #17970

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAYW02000001
11.7 KB
7 CDS

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whole genome shotgun sequence
NZ_AAYW02000002
316.1 KB
321 CDS

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whole genome shotgun sequence
NZ_AAYW02000003
151.8 KB
160 CDS

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whole genome shotgun sequence
NZ_AAYW02000004
313.6 KB
315 CDS

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whole genome shotgun sequence
NZ_AAYW02000005
71.5 KB
75 CDS

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whole genome shotgun sequence
NZ_AAYW02000006
49.8 KB
41 CDS

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whole genome shotgun sequence
NZ_AAYW02000007
169.1 KB
138 CDS

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whole genome shotgun sequence
NZ_AAYW02000008
240.6 KB
271 CDS

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whole genome shotgun sequence
NZ_AAYW02000009
57.6 KB
61 CDS

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whole genome shotgun sequence
NZ_AAYW02000010
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAYW02000011
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAYW02000012
3.3 KB
4 CDS

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whole genome shotgun sequence
NZ_AAYW02000013
192.5 KB
191 CDS

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whole genome shotgun sequence
NZ_AAYW02000014
142.2 KB
153 CDS

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whole genome shotgun sequence
NZ_AAYW02000015
144.2 KB
178 CDS

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whole genome shotgun sequence
NZ_AAYW02000016
203.7 KB
211 CDS

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whole genome shotgun sequence
NZ_AAYW02000017
152.6 KB
165 CDS

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whole genome shotgun sequence
NZ_AAYW02000018
323.4 KB
337 CDS

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whole genome shotgun sequence
NZ_AAYW02000019
58.4 KB
59 CDS

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whole genome shotgun sequence
NZ_AAYW02000020
108.7 KB
95 CDS

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whole genome shotgun sequence
NZ_AAYW02000021
97.3 KB
90 CDS

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whole genome shotgun sequence
NZ_AAYW02000022
44.1 KB
31 CDS

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whole genome shotgun sequence
NZ_AAYW02000023
27.7 KB
37 CDS

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whole genome shotgun sequence
NZ_AAYW02000024
807 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAYW02000025
1.3 KB
2 CDS

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Taxonomy

External Links

Clostridium sp. L2-50

Search Genome

Sequences

PubMed Search for Clostridium sp. L2-50

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