Coprococcus comes ATCC 27758

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 42.5%, Released Date: March 12, 2009 #17982

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABVR01000001
529 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABVR01000002
592 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000003
805 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVR01000004
529 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000005
558 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVR01000006
587 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000007
649 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABVR01000008
707 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000009
581 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000010
943 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000011
757 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABVR01000012
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABVR01000013
1.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABVR01000014
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABVR01000015
876 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABVR01000016
734 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABVR01000017
815 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABVR01000018
988 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABVR01000019
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABVR01000020
1.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ABVR01000021
2.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABVR01000022
4.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABVR01000023
5.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ABVR01000024
6.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABVR01000025
10.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ABVR01000026
24.4 KB
36 CDS

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whole genome shotgun sequence
NZ_ABVR01000027
20.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ABVR01000028
31.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ABVR01000029
37.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ABVR01000030
44.3 KB
57 CDS

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whole genome shotgun sequence
NZ_ABVR01000031
56.7 KB
66 CDS

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whole genome shotgun sequence
NZ_ABVR01000032
76.8 KB
91 CDS

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whole genome shotgun sequence
NZ_ABVR01000033
66.0 KB
85 CDS

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whole genome shotgun sequence
NZ_ABVR01000034
77.5 KB
95 CDS

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whole genome shotgun sequence
NZ_ABVR01000035
79.1 KB
100 CDS

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whole genome shotgun sequence
NZ_ABVR01000036
92.4 KB
119 CDS

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whole genome shotgun sequence
NZ_ABVR01000037
198.3 KB
258 CDS

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whole genome shotgun sequence
NZ_ABVR01000038
198.5 KB
248 CDS

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whole genome shotgun sequence
NZ_ABVR01000039
228.9 KB
252 CDS

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whole genome shotgun sequence
NZ_ABVR01000040
322.6 KB
383 CDS

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whole genome shotgun sequence
NZ_ABVR01000041
596.9 KB
718 CDS

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whole genome shotgun sequence
NZ_ABVR01000042
293.6 KB
382 CDS

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whole genome shotgun sequence
NZ_ABVR01000043
183.3 KB
223 CDS

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whole genome shotgun sequence
NZ_ABVR01000044
35.2 KB
37 CDS

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whole genome shotgun sequence
NZ_ABVR01000045
237.6 KB
322 CDS

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whole genome shotgun sequence
NZ_ABVR01000046
214.5 KB
260 CDS

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Taxonomy

External Links

Coprococcus comes ATCC 27758

Search Genome

Sequences

PubMed Search for Coprococcus comes ATCC 27758

Related Genomes