Corynebacterium amycolatum SK46

J. Craig Venter Institute

Genome Size: 2.6 megabases, GC Content: 58.6%, Released Date: Nov. 21, 2008 #17985

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABZU01000001
425.8 KB
375 CDS

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whole genome shotgun sequence
NZ_ABZU01000002
302.1 KB
280 CDS

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whole genome shotgun sequence
NZ_ABZU01000003
162.1 KB
140 CDS

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whole genome shotgun sequence
NZ_ABZU01000004
144.0 KB
120 CDS

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whole genome shotgun sequence
NZ_ABZU01000005
137.8 KB
114 CDS

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whole genome shotgun sequence
NZ_ABZU01000006
132.5 KB
116 CDS

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whole genome shotgun sequence
NZ_ABZU01000007
125.2 KB
107 CDS

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whole genome shotgun sequence
NZ_ABZU01000008
112.1 KB
99 CDS

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whole genome shotgun sequence
NZ_ABZU01000009
107.2 KB
91 CDS

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whole genome shotgun sequence
NZ_ABZU01000010
102.9 KB
88 CDS

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whole genome shotgun sequence
NZ_ABZU01000011
96.8 KB
74 CDS

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whole genome shotgun sequence
NZ_ABZU01000012
59.5 KB
43 CDS

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whole genome shotgun sequence
NZ_ABZU01000013
56.0 KB
52 CDS

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whole genome shotgun sequence
NZ_ABZU01000014
53.1 KB
46 CDS

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whole genome shotgun sequence
NZ_ABZU01000015
46.1 KB
35 CDS

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whole genome shotgun sequence
NZ_ABZU01000016
45.3 KB
43 CDS

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whole genome shotgun sequence
NZ_ABZU01000017
43.4 KB
38 CDS

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whole genome shotgun sequence
NZ_ABZU01000018
42.3 KB
39 CDS

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whole genome shotgun sequence
NZ_ABZU01000019
32.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ABZU01000020
29.5 KB
29 CDS

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whole genome shotgun sequence
NZ_ABZU01000021
24.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ABZU01000022
23.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ABZU01000023
17.4 KB
14 CDS

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whole genome shotgun sequence
NZ_ABZU01000024
15.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ABZU01000025
13.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABZU01000026
12.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ABZU01000027
12.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ABZU01000028
11.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ABZU01000029
9.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABZU01000030
9.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABZU01000031
6.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ABZU01000032
5.1 KB
5 CDS

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whole genome shotgun sequence
NZ_ABZU01000033
5.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABZU01000034
4.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ABZU01000035
3.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZU01000036
3.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZU01000037
3.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000038
3.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000039
2.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000040
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000041
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000042
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABZU01000043
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABZU01000044
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABZU01000045
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000046
705 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000047
583 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZU01000048
503 bytes
0 CDS

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Taxonomy

External Links

Corynebacterium amycolatum SK46

Search Genome

Sequences

PubMed Search for Corynebacterium amycolatum SK46

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