Corynebacterium jeikeium K411

Bielefeld Univ

Genome Size: 2.51 megabases, GC Content: 61.4%, Released Date: June 27, 2005 #16910

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

complete genome
NC_007164
2.3 MB
2104 CDS

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plasmid pKW4
NC_003080
14.0 KB
16 CDS

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References

Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora
Tauch,A., Kaiser,O., Hain,T., Goesmann,A., Weisshaar,B., Albersmeier,A., Bekel,T., Bischoff,N., Brune,I., Chakraborty,T., Kalinowski,J., Meyer,F., Rupp,O., Schneiker,S., Viehoever,P. and Puhler,A. J. Bacteriol. 187 (13), 4671-4682 (2005)
PubMed, PubGet, HubMed

Taxonomy

External Links

Corynebacterium jeikeium K411

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Sequences

References

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