Corynebacterium kroppenstedtii DSM 44385

Bielefeld Univ

Genome Size: 2.4 megabases, GC Content: 57.5%, Released Date: May 19, 2009 #16911

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

complete genome
NC_012704
2.3 MB
2018 CDS

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References

Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids
Tauch,A., Schneider,J., Szczepanowski,R., Tilker,A., Viehoever,P., Gartemann,K.H., Arnold,W., Blom,J., Brinkrolf,K., Brune,I., Gotker,S., Weisshaar,B., Goesmann,A., Droge,M. and Puhler,A. J. Biotechnol. 136 (1-2), 22-30 (2008)
PubMed, PubGet, HubMed

Taxonomy

External Links

Corynebacterium kroppenstedtii DSM 44385

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Sequences

References

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