Desulfonatronospira thiodismutans ASO3-1

DOE Joint Genome Institute

GC Content: 51.3%, Released Date: March 17, 2009 #18004

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACJN01000001
573.7 KB
537 CDS

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whole genome shotgun sequence
NZ_ACJN01000002
463.5 KB
471 CDS

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whole genome shotgun sequence
NZ_ACJN01000003
288.1 KB
279 CDS

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whole genome shotgun sequence
NZ_ACJN01000004
200.8 KB
187 CDS

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whole genome shotgun sequence
NZ_ACJN01000005
197.4 KB
178 CDS

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whole genome shotgun sequence
NZ_ACJN01000006
193.9 KB
198 CDS

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whole genome shotgun sequence
NZ_ACJN01000007
164.6 KB
162 CDS

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whole genome shotgun sequence
NZ_ACJN01000008
150.6 KB
142 CDS

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whole genome shotgun sequence
NZ_ACJN01000009
144.6 KB
134 CDS

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whole genome shotgun sequence
NZ_ACJN01000010
137.0 KB
117 CDS

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whole genome shotgun sequence
NZ_ACJN01000011
136.9 KB
128 CDS

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whole genome shotgun sequence
NZ_ACJN01000012
122.2 KB
120 CDS

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whole genome shotgun sequence
NZ_ACJN01000013
119.7 KB
106 CDS

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whole genome shotgun sequence
NZ_ACJN01000014
91.4 KB
98 CDS

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whole genome shotgun sequence
NZ_ACJN01000015
84.2 KB
71 CDS

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whole genome shotgun sequence
NZ_ACJN01000016
64.7 KB
44 CDS

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whole genome shotgun sequence
NZ_ACJN01000017
59.1 KB
52 CDS

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whole genome shotgun sequence
NZ_ACJN01000018
52.3 KB
52 CDS

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whole genome shotgun sequence
NZ_ACJN01000019
51.9 KB
65 CDS

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whole genome shotgun sequence
NZ_ACJN01000020
50.1 KB
46 CDS

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whole genome shotgun sequence
NZ_ACJN01000021
47.7 KB
46 CDS

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whole genome shotgun sequence
NZ_ACJN01000022
44.2 KB
37 CDS

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whole genome shotgun sequence
NZ_ACJN01000023
43.2 KB
37 CDS

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whole genome shotgun sequence
NZ_ACJN01000024
37.4 KB
41 CDS

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whole genome shotgun sequence
NZ_ACJN01000025
37.2 KB
32 CDS

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whole genome shotgun sequence
NZ_ACJN01000026
34.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ACJN01000027
33.5 KB
32 CDS

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whole genome shotgun sequence
NZ_ACJN01000028
23.2 KB
30 CDS

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whole genome shotgun sequence
NZ_ACJN01000029
23.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACJN01000030
22.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ACJN01000031
21.1 KB
26 CDS

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whole genome shotgun sequence
NZ_ACJN01000032
17.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ACJN01000033
16.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ACJN01000034
16.0 KB
23 CDS

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whole genome shotgun sequence
NZ_ACJN01000035
11.9 KB
15 CDS

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whole genome shotgun sequence
NZ_ACJN01000036
10.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ACJN01000037
10.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ACJN01000038
9.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ACJN01000039
9.2 KB
12 CDS

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whole genome shotgun sequence
NZ_ACJN01000040
8.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ACJN01000041
8.1 KB
12 CDS

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whole genome shotgun sequence
NZ_ACJN01000042
7.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACJN01000043
5.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACJN01000044
4.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ACJN01000045
4.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ACJN01000046
4.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACJN01000047
3.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACJN01000048
3.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACJN01000049
3.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACJN01000050
2.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ACJN01000051
2.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ACJN01000052
2.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ACJN01000053
2.5 KB
3 CDS

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Taxonomy

External Links

Desulfonatronospira thiodismutans ASO3-1

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Sequences

PubMed Search for Desulfonatronospira thiodismutans ASO3-1

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