Desulfovibrio piger ATCC 29098

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 63.0%, Released Date: Oct. 23, 2008 #18005

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABXU01000001
53.4 KB
63 CDS

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whole genome shotgun sequence
NZ_ABXU01000002
9.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ABXU01000003
25.2 KB
25 CDS

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whole genome shotgun sequence
NZ_ABXU01000004
6.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ABXU01000005
3.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXU01000006
14.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ABXU01000007
17.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ABXU01000008
9.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ABXU01000009
43.5 KB
53 CDS

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whole genome shotgun sequence
NZ_ABXU01000010
25.3 KB
26 CDS

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whole genome shotgun sequence
NZ_ABXU01000011
58.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ABXU01000012
29.4 KB
33 CDS

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whole genome shotgun sequence
NZ_ABXU01000013
13.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABXU01000014
371 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000015
54.8 KB
52 CDS

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whole genome shotgun sequence
NZ_ABXU01000016
4.0 KB
6 CDS

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whole genome shotgun sequence
NZ_ABXU01000017
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000018
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000019
11.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ABXU01000020
6.1 KB
9 CDS

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whole genome shotgun sequence
NZ_ABXU01000021
97.5 KB
113 CDS

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whole genome shotgun sequence
NZ_ABXU01000022
104.5 KB
107 CDS

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whole genome shotgun sequence
NZ_ABXU01000023
52.5 KB
62 CDS

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whole genome shotgun sequence
NZ_ABXU01000024
36.9 KB
50 CDS

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whole genome shotgun sequence
NZ_ABXU01000025
38.9 KB
53 CDS

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whole genome shotgun sequence
NZ_ABXU01000026
134.6 KB
142 CDS

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whole genome shotgun sequence
NZ_ABXU01000027
114.5 KB
132 CDS

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whole genome shotgun sequence
NZ_ABXU01000028
6.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABXU01000029
153.5 KB
174 CDS

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whole genome shotgun sequence
NZ_ABXU01000030
28.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ABXU01000031
40.5 KB
36 CDS

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whole genome shotgun sequence
NZ_ABXU01000032
10.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABXU01000033
38.3 KB
50 CDS

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whole genome shotgun sequence
NZ_ABXU01000034
44.6 KB
51 CDS

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whole genome shotgun sequence
NZ_ABXU01000035
5.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ABXU01000036
12.3 KB
18 CDS

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whole genome shotgun sequence
NZ_ABXU01000037
25.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ABXU01000038
13.1 KB
18 CDS

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whole genome shotgun sequence
NZ_ABXU01000039
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000040
37.5 KB
46 CDS

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whole genome shotgun sequence
NZ_ABXU01000041
11.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ABXU01000042
12.3 KB
13 CDS

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whole genome shotgun sequence
NZ_ABXU01000043
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABXU01000044
2.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXU01000045
5.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ABXU01000046
11.4 KB
15 CDS

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whole genome shotgun sequence
NZ_ABXU01000047
4.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABXU01000048
1.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ABXU01000049
14.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ABXU01000050
4.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ABXU01000051
6.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ABXU01000052
15.2 KB
17 CDS

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whole genome shotgun sequence
NZ_ABXU01000053
8.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABXU01000054
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXU01000055
46.0 KB
44 CDS

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whole genome shotgun sequence
NZ_ABXU01000056
8.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ABXU01000057
4.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXU01000058
106.5 KB
110 CDS

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whole genome shotgun sequence
NZ_ABXU01000059
4.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ABXU01000060
24.7 KB
27 CDS

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whole genome shotgun sequence
NZ_ABXU01000061
67.2 KB
87 CDS

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whole genome shotgun sequence
NZ_ABXU01000062
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXU01000063
14.2 KB
17 CDS

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whole genome shotgun sequence
NZ_ABXU01000064
68.0 KB
71 CDS

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whole genome shotgun sequence
NZ_ABXU01000065
67.9 KB
74 CDS

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whole genome shotgun sequence
NZ_ABXU01000066
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXU01000067
73.9 KB
76 CDS

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whole genome shotgun sequence
NZ_ABXU01000068
42.2 KB
48 CDS

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whole genome shotgun sequence
NZ_ABXU01000069
68.9 KB
70 CDS

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whole genome shotgun sequence
NZ_ABXU01000070
5.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABXU01000071
15.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ABXU01000072
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000073
9.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ABXU01000074
85.5 KB
93 CDS

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whole genome shotgun sequence
NZ_ABXU01000075
53.0 KB
61 CDS

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whole genome shotgun sequence
NZ_ABXU01000076
90.7 KB
107 CDS

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whole genome shotgun sequence
NZ_ABXU01000077
6.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ABXU01000078
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000079
35.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ABXU01000080
10.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABXU01000081
36.4 KB
41 CDS

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whole genome shotgun sequence
NZ_ABXU01000082
21.9 KB
23 CDS

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whole genome shotgun sequence
NZ_ABXU01000083
72.6 KB
78 CDS

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whole genome shotgun sequence
NZ_ABXU01000084
32.6 KB
42 CDS

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whole genome shotgun sequence
NZ_ABXU01000085
19.2 KB
29 CDS

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whole genome shotgun sequence
NZ_ABXU01000086
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000087
2.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000088
70.0 KB
72 CDS

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whole genome shotgun sequence
NZ_ABXU01000089
33.1 KB
40 CDS

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whole genome shotgun sequence
NZ_ABXU01000090
24.6 KB
30 CDS

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whole genome shotgun sequence
NZ_ABXU01000091
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABXU01000092
800 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000093
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000094
1.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXU01000095
1.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ABXU01000096
810 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000097
602 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXU01000098
800 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000099
908 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000100
629 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000101
629 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000102
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000103
1013 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXU01000104
826 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXU01000105
632 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000106
1005 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000107
834 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000108
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXU01000109
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000110
789 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000111
828 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABXU01000112
733 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXU01000113
675 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000114
673 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000115
890 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000116
877 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000117
877 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000118
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000119
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000120
751 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000121
864 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000122
576 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000123
546 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXU01000124
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000125
522 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXU01000126
522 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXU01000127
538 bytes
1 CDS

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Taxonomy

External Links

Desulfovibrio piger ATCC 29098

Search Genome

Sequences

PubMed Search for Desulfovibrio piger ATCC 29098

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