Dialister microaerophilus UPII 345-E

J. Craig Venter Institute

Released Date: Dec. 1, 2010 #20243

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00070, whole genome shotgun sequence
NZ_AENT01000001
137.0 KB
286 CDS

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contig00032, whole genome shotgun sequence
NZ_AENT01000002
10.4 KB
4 CDS

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contig00008, whole genome shotgun sequence
NZ_AENT01000003
1.7 KB
4 CDS

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contig00038, whole genome shotgun sequence
NZ_AENT01000004
41.6 KB
82 CDS

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contig00028, whole genome shotgun sequence
NZ_AENT01000005
3.1 KB
0 CDS

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contig00003, whole genome shotgun sequence
NZ_AENT01000006
947 bytes
2 CDS

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contig00002, whole genome shotgun sequence
NZ_AENT01000007
75.3 KB
138 CDS

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contig00029, whole genome shotgun sequence
NZ_AENT01000008
1.4 KB
0 CDS

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contig00051, whole genome shotgun sequence
NZ_AENT01000009
1.2 KB
4 CDS

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contig00027, whole genome shotgun sequence
NZ_AENT01000010
120.1 KB
204 CDS

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contig00039, whole genome shotgun sequence
NZ_AENT01000011
804 bytes
0 CDS

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contig00037, whole genome shotgun sequence
NZ_AENT01000012
176.3 KB
356 CDS

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contig00045, whole genome shotgun sequence
NZ_AENT01000013
1.1 KB
2 CDS

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contig00031, whole genome shotgun sequence
NZ_AENT01000014
2.0 KB
2 CDS

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contig00020, whole genome shotgun sequence
NZ_AENT01000015
28.9 KB
62 CDS

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contig00036, whole genome shotgun sequence
NZ_AENT01000016
103.2 KB
198 CDS

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contig00011, whole genome shotgun sequence
NZ_AENT01000017
36.2 KB
56 CDS

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contig00061, whole genome shotgun sequence
NZ_AENT01000018
7.0 KB
6 CDS

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contig00012, whole genome shotgun sequence
NZ_AENT01000019
23.5 KB
48 CDS

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contig00034, whole genome shotgun sequence
NZ_AENT01000020
7.7 KB
8 CDS

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contig00014, whole genome shotgun sequence
NZ_AENT01000021
26.1 KB
48 CDS

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contig00035, whole genome shotgun sequence
NZ_AENT01000022
7.3 KB
22 CDS

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contig00048, whole genome shotgun sequence
NZ_AENT01000023
514 bytes
0 CDS

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contig00007, whole genome shotgun sequence
NZ_AENT01000024
209.9 KB
404 CDS

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contig00004, whole genome shotgun sequence
NZ_AENT01000025
76.7 KB
150 CDS

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contig00010, whole genome shotgun sequence
NZ_AENT01000026
31.9 KB
42 CDS

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contig00013, whole genome shotgun sequence
NZ_AENT01000027
47.5 KB
112 CDS

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contig00023, whole genome shotgun sequence
NZ_AENT01000028
39.0 KB
90 CDS

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contig00009, whole genome shotgun sequence
NZ_AENT01000029
6.7 KB
8 CDS

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contig00005, whole genome shotgun sequence
NZ_AENT01000030
126.0 KB
250 CDS

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contig00030, whole genome shotgun sequence
NZ_AENT01000031
6.5 KB
20 CDS

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contig00006, whole genome shotgun sequence
NZ_AENT01000032
5.7 KB
12 CDS

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Taxonomy

External Links

Dialister microaerophilus UPII 345-E

Search Genome

Sequences

PubMed Search for Dialister microaerophilus UPII 345-E

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