Dorea longicatena DSM 13814

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 41.4%, Released Date: March 2, 2007 #18014

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAXB02000001
400.8 KB
422 CDS

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whole genome shotgun sequence
NZ_AAXB02000002
385.7 KB
406 CDS

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whole genome shotgun sequence
NZ_AAXB02000003
173.1 KB
196 CDS

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whole genome shotgun sequence
NZ_AAXB02000004
172.2 KB
185 CDS

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whole genome shotgun sequence
NZ_AAXB02000005
141.5 KB
160 CDS

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whole genome shotgun sequence
NZ_AAXB02000006
135.9 KB
148 CDS

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whole genome shotgun sequence
NZ_AAXB02000007
114.3 KB
117 CDS

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whole genome shotgun sequence
NZ_AAXB02000008
113.4 KB
111 CDS

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whole genome shotgun sequence
NZ_AAXB02000009
104.6 KB
98 CDS

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whole genome shotgun sequence
NZ_AAXB02000010
95.7 KB
87 CDS

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whole genome shotgun sequence
NZ_AAXB02000011
90.7 KB
94 CDS

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whole genome shotgun sequence
NZ_AAXB02000012
87.9 KB
100 CDS

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whole genome shotgun sequence
NZ_AAXB02000013
79.9 KB
95 CDS

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whole genome shotgun sequence
NZ_AAXB02000014
76.5 KB
68 CDS

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whole genome shotgun sequence
NZ_AAXB02000015
74.9 KB
68 CDS

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whole genome shotgun sequence
NZ_AAXB02000016
74.7 KB
84 CDS

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whole genome shotgun sequence
NZ_AAXB02000017
71.2 KB
78 CDS

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whole genome shotgun sequence
NZ_AAXB02000018
71.0 KB
70 CDS

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whole genome shotgun sequence
NZ_AAXB02000019
48.4 KB
50 CDS

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whole genome shotgun sequence
NZ_AAXB02000020
48.3 KB
48 CDS

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whole genome shotgun sequence
NZ_AAXB02000021
44.3 KB
48 CDS

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whole genome shotgun sequence
NZ_AAXB02000022
37.2 KB
35 CDS

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whole genome shotgun sequence
NZ_AAXB02000023
33.7 KB
36 CDS

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whole genome shotgun sequence
NZ_AAXB02000024
29.1 KB
26 CDS

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whole genome shotgun sequence
NZ_AAXB02000025
27.2 KB
26 CDS

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whole genome shotgun sequence
NZ_AAXB02000026
22.3 KB
18 CDS

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whole genome shotgun sequence
NZ_AAXB02000027
22.0 KB
20 CDS

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whole genome shotgun sequence
NZ_AAXB02000028
11.5 KB
10 CDS

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whole genome shotgun sequence
NZ_AAXB02000029
11.0 KB
11 CDS

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whole genome shotgun sequence
NZ_AAXB02000030
7.3 KB
10 CDS

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whole genome shotgun sequence
NZ_AAXB02000031
6.4 KB
6 CDS

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whole genome shotgun sequence
NZ_AAXB02000032
3.9 KB
4 CDS

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whole genome shotgun sequence
NZ_AAXB02000033
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_AAXB02000034
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAXB02000035
1.9 KB
5 CDS

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whole genome shotgun sequence
NZ_AAXB02000036
1.9 KB
4 CDS

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whole genome shotgun sequence
NZ_AAXB02000037
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_AAXB02000038
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAXB02000039
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAXB02000040
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAXB02000041
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_AAXB02000042
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_AAXB02000043
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAXB02000044
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_AAXB02000045
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAXB02000046
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_AAXB02000047
965 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAXB02000048
869 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAXB02000049
844 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAXB02000050
788 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAXB02000051
769 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAXB02000052
695 bytes
1 CDS

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Taxonomy

External Links

Dorea longicatena DSM 13814

Search Genome

Sequences

PubMed Search for Dorea longicatena DSM 13814

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