Eikenella corrodens ATCC 23834

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 55.8%, Released Date: Feb. 4, 2009 #18016

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACEA01000001
15.0 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEA01000002
68.4 KB
78 CDS

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whole genome shotgun sequence
NZ_ACEA01000003
72.5 KB
101 CDS

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whole genome shotgun sequence
NZ_ACEA01000004
60.3 KB
66 CDS

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whole genome shotgun sequence
NZ_ACEA01000005
44.3 KB
63 CDS

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whole genome shotgun sequence
NZ_ACEA01000006
37.5 KB
46 CDS

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whole genome shotgun sequence
NZ_ACEA01000007
17.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ACEA01000008
9.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ACEA01000009
30.5 KB
35 CDS

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whole genome shotgun sequence
NZ_ACEA01000010
379 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACEA01000011
750 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACEA01000012
133.9 KB
174 CDS

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whole genome shotgun sequence
NZ_ACEA01000013
13.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ACEA01000014
15.2 KB
25 CDS

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whole genome shotgun sequence
NZ_ACEA01000015
27.1 KB
31 CDS

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whole genome shotgun sequence
NZ_ACEA01000016
77.9 KB
94 CDS

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whole genome shotgun sequence
NZ_ACEA01000017
273.7 KB
355 CDS

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whole genome shotgun sequence
NZ_ACEA01000018
14.4 KB
22 CDS

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whole genome shotgun sequence
NZ_ACEA01000019
34.3 KB
41 CDS

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whole genome shotgun sequence
NZ_ACEA01000020
32.9 KB
47 CDS

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whole genome shotgun sequence
NZ_ACEA01000021
47.7 KB
69 CDS

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whole genome shotgun sequence
NZ_ACEA01000022
31.1 KB
37 CDS

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whole genome shotgun sequence
NZ_ACEA01000023
76.1 KB
87 CDS

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whole genome shotgun sequence
NZ_ACEA01000024
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACEA01000025
10.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ACEA01000026
16.4 KB
24 CDS

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whole genome shotgun sequence
NZ_ACEA01000027
20.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ACEA01000028
5.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ACEA01000029
40.0 KB
47 CDS

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whole genome shotgun sequence
NZ_ACEA01000030
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEA01000031
12.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ACEA01000032
17.2 KB
21 CDS

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whole genome shotgun sequence
NZ_ACEA01000033
55.5 KB
67 CDS

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whole genome shotgun sequence
NZ_ACEA01000034
24.1 KB
37 CDS

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whole genome shotgun sequence
NZ_ACEA01000035
36.4 KB
37 CDS

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whole genome shotgun sequence
NZ_ACEA01000036
10.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ACEA01000037
7.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ACEA01000038
29.9 KB
44 CDS

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whole genome shotgun sequence
NZ_ACEA01000039
20.2 KB
29 CDS

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whole genome shotgun sequence
NZ_ACEA01000040
53.2 KB
72 CDS

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whole genome shotgun sequence
NZ_ACEA01000041
7.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACEA01000042
36.5 KB
46 CDS

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whole genome shotgun sequence
NZ_ACEA01000043
67.4 KB
85 CDS

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whole genome shotgun sequence
NZ_ACEA01000044
12.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEA01000045
73.8 KB
84 CDS

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whole genome shotgun sequence
NZ_ACEA01000046
1.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACEA01000047
39.1 KB
46 CDS

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whole genome shotgun sequence
NZ_ACEA01000048
16.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ACEA01000049
15.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEA01000050
867 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACEA01000051
35.2 KB
54 CDS

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whole genome shotgun sequence
NZ_ACEA01000052
81.1 KB
106 CDS

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whole genome shotgun sequence
NZ_ACEA01000053
26.1 KB
32 CDS

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whole genome shotgun sequence
NZ_ACEA01000054
5.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ACEA01000055
46.4 KB
60 CDS

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whole genome shotgun sequence
NZ_ACEA01000056
3.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACEA01000057
17.1 KB
18 CDS

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whole genome shotgun sequence
NZ_ACEA01000058
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEA01000059
26.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ACEA01000060
65.5 KB
79 CDS

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whole genome shotgun sequence
NZ_ACEA01000061
3.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACEA01000062
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACEA01000063
818 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACEA01000064
617 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACEA01000065
1.1 KB
1 CDS

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Taxonomy

External Links

Eikenella corrodens ATCC 23834

Search Genome

Sequences

PubMed Search for Eikenella corrodens ATCC 23834

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