Enhydrobacter aerosaccus SK60

J. Craig Venter Institute

Genome Size: 4.0 megabases, Released Date: Sept. 8, 2009 #18018

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACYI01000001
29.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ACYI01000002
93.2 KB
89 CDS

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whole genome shotgun sequence
NZ_ACYI01000003
17.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ACYI01000004
9.1 KB
7 CDS

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whole genome shotgun sequence
NZ_ACYI01000005
889 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000006
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACYI01000007
152.1 KB
147 CDS

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whole genome shotgun sequence
NZ_ACYI01000008
3.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000009
24.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ACYI01000010
19.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ACYI01000011
25.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ACYI01000012
742 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000013
3.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYI01000014
829 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000015
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000016
43.9 KB
37 CDS

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whole genome shotgun sequence
NZ_ACYI01000017
1.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYI01000018
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000019
122.2 KB
112 CDS

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whole genome shotgun sequence
NZ_ACYI01000020
46.3 KB
41 CDS

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whole genome shotgun sequence
NZ_ACYI01000021
60.7 KB
64 CDS

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whole genome shotgun sequence
NZ_ACYI01000022
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000023
100.9 KB
113 CDS

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whole genome shotgun sequence
NZ_ACYI01000024
37.8 KB
35 CDS

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whole genome shotgun sequence
NZ_ACYI01000025
7.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYI01000026
16.1 KB
20 CDS

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whole genome shotgun sequence
NZ_ACYI01000027
70.0 KB
66 CDS

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whole genome shotgun sequence
NZ_ACYI01000028
2.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000029
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000030
20.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ACYI01000031
36.2 KB
36 CDS

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whole genome shotgun sequence
NZ_ACYI01000032
556 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000033
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYI01000034
59.4 KB
62 CDS

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whole genome shotgun sequence
NZ_ACYI01000035
89.7 KB
73 CDS

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whole genome shotgun sequence
NZ_ACYI01000036
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000037
25.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ACYI01000038
9.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACYI01000039
40.0 KB
45 CDS

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whole genome shotgun sequence
NZ_ACYI01000040
38.3 KB
42 CDS

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whole genome shotgun sequence
NZ_ACYI01000041
116.7 KB
119 CDS

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whole genome shotgun sequence
NZ_ACYI01000042
8.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ACYI01000043
49.7 KB
51 CDS

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whole genome shotgun sequence
NZ_ACYI01000044
569 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000045
6.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ACYI01000046
112.9 KB
118 CDS

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whole genome shotgun sequence
NZ_ACYI01000047
544 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000048
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000049
108.2 KB
93 CDS

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whole genome shotgun sequence
NZ_ACYI01000050
4.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000051
778 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000052
34.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ACYI01000053
26.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ACYI01000054
18.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ACYI01000055
3.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000056
4.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ACYI01000057
7.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ACYI01000058
12.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ACYI01000059
77.2 KB
70 CDS

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whole genome shotgun sequence
NZ_ACYI01000060
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000061
713 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000062
301.2 KB
287 CDS

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whole genome shotgun sequence
NZ_ACYI01000063
8.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACYI01000064
28.6 KB
26 CDS

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whole genome shotgun sequence
NZ_ACYI01000065
25.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ACYI01000066
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000067
57.5 KB
67 CDS

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whole genome shotgun sequence
NZ_ACYI01000068
122.9 KB
114 CDS

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whole genome shotgun sequence
NZ_ACYI01000069
37.5 KB
39 CDS

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whole genome shotgun sequence
NZ_ACYI01000070
793 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000071
60.8 KB
69 CDS

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whole genome shotgun sequence
NZ_ACYI01000072
8.7 KB
9 CDS

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whole genome shotgun sequence
NZ_ACYI01000073
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000074
1.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000075
700 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000076
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000077
12.5 KB
10 CDS

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whole genome shotgun sequence
NZ_ACYI01000078
26.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ACYI01000079
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000080
74.8 KB
69 CDS

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whole genome shotgun sequence
NZ_ACYI01000081
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACYI01000082
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYI01000083
1.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYI01000084
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACYI01000085
6.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACYI01000086
5.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACYI01000087
8.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYI01000088
18.1 KB
18 CDS

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Taxonomy

External Links

Enhydrobacter aerosaccus SK60

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Sequences

PubMed Search for Enhydrobacter aerosaccus SK60

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