Enterobacteriaceae bacterium 9_2_54FAA

Broad Institute

#20246

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

cont1.1, whole genome shotgun sequence
ADCU01000001
949.1 KB
858 CDS

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cont1.2, whole genome shotgun sequence
ADCU01000002
258.4 KB
253 CDS

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cont1.3, whole genome shotgun sequence
ADCU01000003
63.6 KB
58 CDS

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cont1.4, whole genome shotgun sequence
ADCU01000004
42.4 KB
36 CDS

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cont1.5, whole genome shotgun sequence
ADCU01000005
5.9 KB
9 CDS

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cont1.6, whole genome shotgun sequence
ADCU01000006
90.1 KB
84 CDS

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cont1.7, whole genome shotgun sequence
ADCU01000007
98.5 KB
92 CDS

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cont1.8, whole genome shotgun sequence
ADCU01000008
284.8 KB
272 CDS

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cont1.9, whole genome shotgun sequence
ADCU01000009
103.0 KB
73 CDS

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cont1.10, whole genome shotgun sequence
ADCU01000010
182.1 KB
167 CDS

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cont1.11, whole genome shotgun sequence
ADCU01000011
1.7 KB
1 CDS

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cont1.12, whole genome shotgun sequence
ADCU01000012
63.6 KB
54 CDS

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cont1.13, whole genome shotgun sequence
ADCU01000013
372.7 KB
345 CDS

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cont1.14, whole genome shotgun sequence
ADCU01000014
134.9 KB
115 CDS

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cont1.15, whole genome shotgun sequence
ADCU01000015
185.7 KB
150 CDS

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cont1.16, whole genome shotgun sequence
ADCU01000016
322.8 KB
298 CDS

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cont1.17, whole genome shotgun sequence
ADCU01000017
9.3 KB
10 CDS

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cont1.18, whole genome shotgun sequence
ADCU01000018
3.8 KB
3 CDS

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cont1.19, whole genome shotgun sequence
ADCU01000019
4.0 KB
3 CDS

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cont1.20, whole genome shotgun sequence
ADCU01000020
304.0 KB
278 CDS

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cont1.21, whole genome shotgun sequence
ADCU01000021
299.8 KB
274 CDS

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cont1.22, whole genome shotgun sequence
ADCU01000022
54.8 KB
42 CDS

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cont1.23, whole genome shotgun sequence
ADCU01000023
152.1 KB
161 CDS

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cont1.24, whole genome shotgun sequence
ADCU01000024
192.2 KB
157 CDS

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cont1.25, whole genome shotgun sequence
ADCU01000025
176.7 KB
169 CDS

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cont1.26, whole genome shotgun sequence
ADCU01000026
122.2 KB
106 CDS

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cont1.27, whole genome shotgun sequence
ADCU01000027
34.3 KB
29 CDS

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cont1.28, whole genome shotgun sequence
ADCU01000028
10.1 KB
15 CDS

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cont1.29, whole genome shotgun sequence
ADCU01000029
2.1 KB
2 CDS

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cont1.30, whole genome shotgun sequence
ADCU01000030
1.9 KB
3 CDS

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cont1.31, whole genome shotgun sequence
ADCU01000031
1.6 KB
2 CDS

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cont1.32, whole genome shotgun sequence
ADCU01000032
3.9 KB
0 CDS

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cont1.33, whole genome shotgun sequence
ADCU01000033
2.3 KB
0 CDS

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cont1.34, whole genome shotgun sequence
ADCU01000034
2.0 KB
3 CDS

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cont1.35, whole genome shotgun sequence
ADCU01000035
1.3 KB
3 CDS

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cont1.36, whole genome shotgun sequence
ADCU01000036
1.6 KB
3 CDS

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cont1.37, whole genome shotgun sequence
ADCU01000037
1.1 KB
2 CDS

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cont1.38, whole genome shotgun sequence
ADCU01000038
1.0 KB
3 CDS

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cont1.39, whole genome shotgun sequence
ADCU01000039
1.0 KB
1 CDS

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cont1.40, whole genome shotgun sequence
ADCU01000040
1.0 KB
1 CDS

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cont1.41, whole genome shotgun sequence
ADCU01000041
1.0 KB
1 CDS

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cont1.42, whole genome shotgun sequence
ADCU01000042
963 bytes
1 CDS

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cont1.43, whole genome shotgun sequence
ADCU01000043
949 bytes
1 CDS

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cont1.44, whole genome shotgun sequence
ADCU01000044
923 bytes
2 CDS

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cont1.45, whole genome shotgun sequence
ADCU01000045
921 bytes
2 CDS

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cont1.46, whole genome shotgun sequence
ADCU01000046
884 bytes
2 CDS

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cont1.47, whole genome shotgun sequence
ADCU01000047
861 bytes
1 CDS

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cont1.48, whole genome shotgun sequence
ADCU01000048
834 bytes
0 CDS

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cont1.49, whole genome shotgun sequence
ADCU01000049
821 bytes
3 CDS

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cont1.50, whole genome shotgun sequence
ADCU01000050
818 bytes
1 CDS

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cont1.51, whole genome shotgun sequence
ADCU01000051
793 bytes
2 CDS

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cont1.52, whole genome shotgun sequence
ADCU01000052
785 bytes
2 CDS

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cont1.53, whole genome shotgun sequence
ADCU01000053
768 bytes
2 CDS

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cont1.54, whole genome shotgun sequence
ADCU01000054
701 bytes
0 CDS

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cont1.55, whole genome shotgun sequence
ADCU01000055
680 bytes
1 CDS

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cont1.56, whole genome shotgun sequence
ADCU01000056
633 bytes
0 CDS

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cont1.57, whole genome shotgun sequence
ADCU01000057
616 bytes
1 CDS

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cont1.58, whole genome shotgun sequence
ADCU01000058
604 bytes
1 CDS

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cont1.59, whole genome shotgun sequence
ADCU01000059
589 bytes
0 CDS

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cont1.60, whole genome shotgun sequence
ADCU01000060
547 bytes
1 CDS

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cont1.61, whole genome shotgun sequence
ADCU01000061
529 bytes
1 CDS

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cont1.62, whole genome shotgun sequence
ADCU01000062
528 bytes
1 CDS

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Taxonomy

External Links

Enterobacteriaceae bacterium 9_2_54FAA

Search Genome

Sequences

PubMed Search for Enterobacteriaceae bacterium 9_2_54FAA

Related Genomes