Enterococcus casseliflavus EC30

Broad Institute

GC Content: 42.5%, Released Date: May 28, 2009 #18022

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAH01000001
105.1 KB
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whole genome shotgun sequence
NZ_ACAH01000002
6.4 KB
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whole genome shotgun sequence
NZ_ACAH01000003
153.6 KB
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whole genome shotgun sequence
NZ_ACAH01000004
18.2 KB
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whole genome shotgun sequence
NZ_ACAH01000005
11.7 KB
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whole genome shotgun sequence
NZ_ACAH01000006
76.2 KB
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whole genome shotgun sequence
NZ_ACAH01000007
41.7 KB
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whole genome shotgun sequence
NZ_ACAH01000008
22.2 KB
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whole genome shotgun sequence
NZ_ACAH01000009
71.5 KB
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whole genome shotgun sequence
NZ_ACAH01000010
17.1 KB
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whole genome shotgun sequence
NZ_ACAH01000011
54.4 KB
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whole genome shotgun sequence
NZ_ACAH01000012
4.6 KB
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whole genome shotgun sequence
NZ_ACAH01000013
1.7 KB
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whole genome shotgun sequence
NZ_ACAH01000014
1.2 KB
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whole genome shotgun sequence
NZ_ACAH01000015
3.0 KB
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whole genome shotgun sequence
NZ_ACAH01000016
126.7 KB
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whole genome shotgun sequence
NZ_ACAH01000017
221.5 KB
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whole genome shotgun sequence
NZ_ACAH01000018
79.5 KB
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whole genome shotgun sequence
NZ_ACAH01000019
20.9 KB
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whole genome shotgun sequence
NZ_ACAH01000020
17.7 KB
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whole genome shotgun sequence
NZ_ACAH01000021
17.3 KB
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whole genome shotgun sequence
NZ_ACAH01000022
27.7 KB
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whole genome shotgun sequence
NZ_ACAH01000023
29.6 KB
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whole genome shotgun sequence
NZ_ACAH01000024
260.6 KB
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whole genome shotgun sequence
NZ_ACAH01000025
174.4 KB
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whole genome shotgun sequence
NZ_ACAH01000026
19.8 KB
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whole genome shotgun sequence
NZ_ACAH01000027
23.3 KB
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whole genome shotgun sequence
NZ_ACAH01000028
61.9 KB
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whole genome shotgun sequence
NZ_ACAH01000029
12.7 KB
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whole genome shotgun sequence
NZ_ACAH01000030
26.3 KB
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whole genome shotgun sequence
NZ_ACAH01000031
28.2 KB
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whole genome shotgun sequence
NZ_ACAH01000032
12.6 KB
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whole genome shotgun sequence
NZ_ACAH01000033
16.2 KB
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whole genome shotgun sequence
NZ_ACAH01000034
64.5 KB
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whole genome shotgun sequence
NZ_ACAH01000035
198.5 KB
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whole genome shotgun sequence
NZ_ACAH01000036
34.9 KB
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whole genome shotgun sequence
NZ_ACAH01000037
30.8 KB
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whole genome shotgun sequence
NZ_ACAH01000038
45.9 KB
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whole genome shotgun sequence
NZ_ACAH01000039
41.8 KB
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whole genome shotgun sequence
NZ_ACAH01000040
125.7 KB
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whole genome shotgun sequence
NZ_ACAH01000041
16.8 KB
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whole genome shotgun sequence
NZ_ACAH01000042
88.7 KB
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whole genome shotgun sequence
NZ_ACAH01000043
33.2 KB
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whole genome shotgun sequence
NZ_ACAH01000044
13.6 KB
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whole genome shotgun sequence
NZ_ACAH01000045
19.3 KB
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whole genome shotgun sequence
NZ_ACAH01000046
28.2 KB
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whole genome shotgun sequence
NZ_ACAH01000047
11.7 KB
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whole genome shotgun sequence
NZ_ACAH01000048
225.9 KB
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whole genome shotgun sequence
NZ_ACAH01000049
47.4 KB
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whole genome shotgun sequence
NZ_ACAH01000050
21.3 KB
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whole genome shotgun sequence
NZ_ACAH01000051
38.7 KB
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whole genome shotgun sequence
NZ_ACAH01000052
59.9 KB
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whole genome shotgun sequence
NZ_ACAH01000053
80.1 KB
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whole genome shotgun sequence
NZ_ACAH01000054
14.7 KB
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whole genome shotgun sequence
NZ_ACAH01000055
3.2 KB
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whole genome shotgun sequence
NZ_ACAH01000056
3.4 KB
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whole genome shotgun sequence
NZ_ACAH01000057
45.8 KB
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whole genome shotgun sequence
NZ_ACAH01000058
28.8 KB
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whole genome shotgun sequence
NZ_ACAH01000059
6.4 KB
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whole genome shotgun sequence
NZ_ACAH01000060
55.0 KB
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whole genome shotgun sequence
NZ_ACAH01000061
93.1 KB
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whole genome shotgun sequence
NZ_ACAH01000062
35.1 KB
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whole genome shotgun sequence
NZ_ACAH01000063
16.2 KB
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whole genome shotgun sequence
NZ_ACAH01000064
13.4 KB
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whole genome shotgun sequence
NZ_ACAH01000065
6.6 KB
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whole genome shotgun sequence
NZ_ACAH01000066
528 bytes
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whole genome shotgun sequence
NZ_ACAH01000067
3.2 KB
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whole genome shotgun sequence
NZ_ACAH01000068
1.8 KB
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whole genome shotgun sequence
NZ_ACAH01000069
1.8 KB
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whole genome shotgun sequence
NZ_ACAH01000070
1.6 KB
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whole genome shotgun sequence
NZ_ACAH01000071
1.5 KB
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whole genome shotgun sequence
NZ_ACAH01000072
1.3 KB
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whole genome shotgun sequence
NZ_ACAH01000073
650 bytes
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whole genome shotgun sequence
NZ_ACAH01000074
612 bytes
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whole genome shotgun sequence
NZ_ACAH01000075
571 bytes
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whole genome shotgun sequence
NZ_ACAH01000076
560 bytes
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whole genome shotgun sequence
NZ_ACAH01000077
560 bytes
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whole genome shotgun sequence
NZ_ACAH01000078
528 bytes
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whole genome shotgun sequence
NZ_ACAH01000079
6.6 KB
0 CDS

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Taxonomy

External Links

Enterococcus casseliflavus EC30

Search Genome

Sequences

PubMed Search for Enterococcus casseliflavus EC30

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