Enterococcus faecalis AR01/DG

Broad Institute

Released Date: June 12, 2009 #18023

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAK01000001
731 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000002
709 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000003
799 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000004
545 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000005
620 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000006
803 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000007
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000008
709 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000009
523 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000010
17.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000011
170.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000012
116.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000013
154.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000014
156.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000015
24.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000016
182.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000017
82.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000018
125.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000019
44.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000020
91.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000021
20.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000022
67.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000023
33.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000024
224.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000025
153.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000026
40.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000027
324.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000028
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000029
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000030
145.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000031
105.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000032
87.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000033
254.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000034
54.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000035
21.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000036
3.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000037
32.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000038
3.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAK01000039
5.0 KB
0 CDS

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Taxonomy

External Links

Enterococcus faecalis AR01/DG

Search Genome

Sequences

PubMed Search for Enterococcus faecalis AR01/DG

Related Genomes