Enterococcus faecalis CH188

Broad Institute

GC Content: 37.1%, Released Date: May 20, 2009 #18026

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAV01000001
13.3 KB
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whole genome shotgun sequence
NZ_ACAV01000002
48.7 KB
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whole genome shotgun sequence
NZ_ACAV01000003
6.6 KB
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whole genome shotgun sequence
NZ_ACAV01000004
49.4 KB
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whole genome shotgun sequence
NZ_ACAV01000005
19.7 KB
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whole genome shotgun sequence
NZ_ACAV01000006
84.3 KB
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whole genome shotgun sequence
NZ_ACAV01000007
2.4 KB
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whole genome shotgun sequence
NZ_ACAV01000008
39.5 KB
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whole genome shotgun sequence
NZ_ACAV01000009
19.8 KB
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whole genome shotgun sequence
NZ_ACAV01000010
1.3 KB
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whole genome shotgun sequence
NZ_ACAV01000011
1.4 KB
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whole genome shotgun sequence
NZ_ACAV01000012
1.5 KB
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whole genome shotgun sequence
NZ_ACAV01000013
643 bytes
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whole genome shotgun sequence
NZ_ACAV01000014
2.1 KB
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whole genome shotgun sequence
NZ_ACAV01000015
2.2 KB
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whole genome shotgun sequence
NZ_ACAV01000016
3.8 KB
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whole genome shotgun sequence
NZ_ACAV01000017
35.3 KB
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whole genome shotgun sequence
NZ_ACAV01000018
4.6 KB
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whole genome shotgun sequence
NZ_ACAV01000019
728 bytes
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whole genome shotgun sequence
NZ_ACAV01000020
810 bytes
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whole genome shotgun sequence
NZ_ACAV01000021
1.2 KB
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whole genome shotgun sequence
NZ_ACAV01000022
678 bytes
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whole genome shotgun sequence
NZ_ACAV01000023
31.3 KB
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whole genome shotgun sequence
NZ_ACAV01000024
3.1 KB
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whole genome shotgun sequence
NZ_ACAV01000025
33.6 KB
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whole genome shotgun sequence
NZ_ACAV01000026
735 bytes
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whole genome shotgun sequence
NZ_ACAV01000027
121.3 KB
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whole genome shotgun sequence
NZ_ACAV01000028
1.7 KB
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whole genome shotgun sequence
NZ_ACAV01000029
1.0 KB
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whole genome shotgun sequence
NZ_ACAV01000030
22.0 KB
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whole genome shotgun sequence
NZ_ACAV01000031
6.2 KB
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whole genome shotgun sequence
NZ_ACAV01000032
693 bytes
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whole genome shotgun sequence
NZ_ACAV01000033
192 bytes
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whole genome shotgun sequence
NZ_ACAV01000034
25.6 KB
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whole genome shotgun sequence
NZ_ACAV01000035
15.0 KB
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whole genome shotgun sequence
NZ_ACAV01000036
18.1 KB
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whole genome shotgun sequence
NZ_ACAV01000037
74.2 KB
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whole genome shotgun sequence
NZ_ACAV01000038
32.2 KB
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whole genome shotgun sequence
NZ_ACAV01000039
3.5 KB
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whole genome shotgun sequence
NZ_ACAV01000040
24.3 KB
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whole genome shotgun sequence
NZ_ACAV01000041
15.2 KB
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whole genome shotgun sequence
NZ_ACAV01000042
15.2 KB
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whole genome shotgun sequence
NZ_ACAV01000043
24.8 KB
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whole genome shotgun sequence
NZ_ACAV01000044
127.3 KB
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whole genome shotgun sequence
NZ_ACAV01000045
84.1 KB
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whole genome shotgun sequence
NZ_ACAV01000046
1.9 KB
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whole genome shotgun sequence
NZ_ACAV01000047
3.2 KB
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whole genome shotgun sequence
NZ_ACAV01000048
1.2 KB
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whole genome shotgun sequence
NZ_ACAV01000049
1.1 KB
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whole genome shotgun sequence
NZ_ACAV01000050
1.7 KB
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whole genome shotgun sequence
NZ_ACAV01000051
1.3 KB
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whole genome shotgun sequence
NZ_ACAV01000052
14.7 KB
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whole genome shotgun sequence
NZ_ACAV01000053
32.0 KB
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whole genome shotgun sequence
NZ_ACAV01000054
64.8 KB
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whole genome shotgun sequence
NZ_ACAV01000055
74.1 KB
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whole genome shotgun sequence
NZ_ACAV01000056
4.4 KB
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whole genome shotgun sequence
NZ_ACAV01000057
42.1 KB
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whole genome shotgun sequence
NZ_ACAV01000058
21.3 KB
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whole genome shotgun sequence
NZ_ACAV01000059
19.5 KB
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whole genome shotgun sequence
NZ_ACAV01000060
59.3 KB
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whole genome shotgun sequence
NZ_ACAV01000061
68.2 KB
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whole genome shotgun sequence
NZ_ACAV01000062
5.6 KB
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whole genome shotgun sequence
NZ_ACAV01000063
19.3 KB
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whole genome shotgun sequence
NZ_ACAV01000064
85.3 KB
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whole genome shotgun sequence
NZ_ACAV01000065
2.6 KB
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whole genome shotgun sequence
NZ_ACAV01000066
50.8 KB
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whole genome shotgun sequence
NZ_ACAV01000067
90.9 KB
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whole genome shotgun sequence
NZ_ACAV01000068
31.2 KB
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whole genome shotgun sequence
NZ_ACAV01000069
13.0 KB
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whole genome shotgun sequence
NZ_ACAV01000070
24.2 KB
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whole genome shotgun sequence
NZ_ACAV01000071
18.2 KB
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whole genome shotgun sequence
NZ_ACAV01000072
77.4 KB
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whole genome shotgun sequence
NZ_ACAV01000073
73.0 KB
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whole genome shotgun sequence
NZ_ACAV01000074
39.9 KB
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whole genome shotgun sequence
NZ_ACAV01000075
34.4 KB
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whole genome shotgun sequence
NZ_ACAV01000076
33.5 KB
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whole genome shotgun sequence
NZ_ACAV01000077
15.1 KB
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whole genome shotgun sequence
NZ_ACAV01000078
38.8 KB
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whole genome shotgun sequence
NZ_ACAV01000079
17.2 KB
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whole genome shotgun sequence
NZ_ACAV01000080
31.0 KB
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whole genome shotgun sequence
NZ_ACAV01000081
15.0 KB
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whole genome shotgun sequence
NZ_ACAV01000082
37.3 KB
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whole genome shotgun sequence
NZ_ACAV01000083
25.3 KB
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whole genome shotgun sequence
NZ_ACAV01000084
39.9 KB
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whole genome shotgun sequence
NZ_ACAV01000085
40.6 KB
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whole genome shotgun sequence
NZ_ACAV01000086
8.2 KB
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whole genome shotgun sequence
NZ_ACAV01000087
20.9 KB
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whole genome shotgun sequence
NZ_ACAV01000088
94.2 KB
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whole genome shotgun sequence
NZ_ACAV01000089
33.3 KB
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whole genome shotgun sequence
NZ_ACAV01000090
54.9 KB
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whole genome shotgun sequence
NZ_ACAV01000091
5.0 KB
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whole genome shotgun sequence
NZ_ACAV01000092
5.8 KB
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whole genome shotgun sequence
NZ_ACAV01000093
15.2 KB
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whole genome shotgun sequence
NZ_ACAV01000094
3.6 KB
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whole genome shotgun sequence
NZ_ACAV01000095
1.9 KB
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whole genome shotgun sequence
NZ_ACAV01000096
2.4 KB
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whole genome shotgun sequence
NZ_ACAV01000097
8.1 KB
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whole genome shotgun sequence
NZ_ACAV01000098
5.1 KB
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whole genome shotgun sequence
NZ_ACAV01000099
3.4 KB
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whole genome shotgun sequence
NZ_ACAV01000100
51.6 KB
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whole genome shotgun sequence
NZ_ACAV01000101
2.9 KB
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whole genome shotgun sequence
NZ_ACAV01000102
28.7 KB
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whole genome shotgun sequence
NZ_ACAV01000103
30.7 KB
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whole genome shotgun sequence
NZ_ACAV01000104
68.9 KB
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whole genome shotgun sequence
NZ_ACAV01000105
2.4 KB
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whole genome shotgun sequence
NZ_ACAV01000106
5.5 KB
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whole genome shotgun sequence
NZ_ACAV01000107
25.5 KB
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whole genome shotgun sequence
NZ_ACAV01000108
40.1 KB
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whole genome shotgun sequence
NZ_ACAV01000109
80.9 KB
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whole genome shotgun sequence
NZ_ACAV01000110
28.5 KB
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whole genome shotgun sequence
NZ_ACAV01000111
105.9 KB
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whole genome shotgun sequence
NZ_ACAV01000112
48.8 KB
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whole genome shotgun sequence
NZ_ACAV01000113
615 bytes
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whole genome shotgun sequence
NZ_ACAV01000114
1005 bytes
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whole genome shotgun sequence
NZ_ACAV01000115
1.0 KB
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whole genome shotgun sequence
NZ_ACAV01000116
617 bytes
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whole genome shotgun sequence
NZ_ACAV01000117
648 bytes
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whole genome shotgun sequence
NZ_ACAV01000118
789 bytes
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whole genome shotgun sequence
NZ_ACAV01000119
1.1 KB
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whole genome shotgun sequence
NZ_ACAV01000120
5.6 KB
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Taxonomy

External Links

Enterococcus faecalis CH188

Search Genome

Sequences

PubMed Search for Enterococcus faecalis CH188

Related Genomes