Enterococcus faecalis D6

Broad Institute

GC Content: 37.5%, Released Date: May 20, 2009 #18027

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAT01000001
614 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000002
809 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000003
135.8 KB
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whole genome shotgun sequence
NZ_ACAT01000004
43.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000005
7.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000006
15.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000007
180.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000008
29.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000009
169.2 KB
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whole genome shotgun sequence
NZ_ACAT01000010
41.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000011
111.3 KB
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whole genome shotgun sequence
NZ_ACAT01000012
253.2 KB
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whole genome shotgun sequence
NZ_ACAT01000013
11.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000014
104.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000015
5.6 KB
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whole genome shotgun sequence
NZ_ACAT01000016
101.5 KB
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whole genome shotgun sequence
NZ_ACAT01000017
52.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000018
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000019
9.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000020
8.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000021
41.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000022
246.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000023
170.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000024
140.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000025
109.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000026
50.1 KB
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whole genome shotgun sequence
NZ_ACAT01000027
26.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000028
63.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000029
16.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000030
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000031
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000032
216.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000033
28.3 KB
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whole genome shotgun sequence
NZ_ACAT01000034
561 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000035
959 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000036
285.9 KB
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whole genome shotgun sequence
NZ_ACAT01000037
100.9 KB
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whole genome shotgun sequence
NZ_ACAT01000038
14.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000039
5.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000040
6.9 KB
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whole genome shotgun sequence
NZ_ACAT01000041
598 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000042
781 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000043
717 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000044
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000045
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACAT01000046
411 bytes
0 CDS

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Taxonomy

External Links

Enterococcus faecalis D6

Search Genome

Sequences

PubMed Search for Enterococcus faecalis D6

Related Genomes