Enterococcus faecalis E1Sol

Broad Institute

Released Date: June 12, 2009 #18029

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAQ01000001
1.1 KB
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whole genome shotgun sequence
NZ_ACAQ01000002
79.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000003
20.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000004
2.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000005
50.1 KB
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whole genome shotgun sequence
NZ_ACAQ01000006
12.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000007
82.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000008
80.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000009
59.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000010
40.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000011
613 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAQ01000012
1.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000013
1.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000014
535 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAQ01000015
1.3 KB
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whole genome shotgun sequence
NZ_ACAQ01000016
17.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000017
26.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000018
62.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000019
146.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000020
32.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000021
14.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000022
9.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000023
54.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000024
1.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000025
77.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000026
116.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000027
10.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000028
11.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000029
1.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000030
3.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000031
27.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000032
5.1 KB
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whole genome shotgun sequence
NZ_ACAQ01000033
21.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000034
8.1 KB
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whole genome shotgun sequence
NZ_ACAQ01000035
9.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000036
182.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000037
739 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACAQ01000038
38.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000039
38.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000040
37.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000041
27.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000042
26.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000043
2.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000044
35.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000045
49.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000046
151.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000047
47.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000048
53.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000049
186.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000050
327.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000051
5.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000052
92.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000053
29.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000054
36.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000055
23.1 KB
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whole genome shotgun sequence
NZ_ACAQ01000056
28.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000057
2.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000058
11.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000059
20.4 KB
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whole genome shotgun sequence
NZ_ACAQ01000060
28.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000061
2.6 KB
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whole genome shotgun sequence
NZ_ACAQ01000062
30.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000063
64.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000064
25.9 KB
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whole genome shotgun sequence
NZ_ACAQ01000065
3.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000066
14.7 KB
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whole genome shotgun sequence
NZ_ACAQ01000067
3.1 KB
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whole genome shotgun sequence
NZ_ACAQ01000068
10.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000069
7.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000070
3.8 KB
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whole genome shotgun sequence
NZ_ACAQ01000071
2.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000072
6.2 KB
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whole genome shotgun sequence
NZ_ACAQ01000073
2.0 KB
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whole genome shotgun sequence
NZ_ACAQ01000074
6.5 KB
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whole genome shotgun sequence
NZ_ACAQ01000075
25.5 KB
0 CDS

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Taxonomy

External Links

Enterococcus faecalis E1Sol

Search Genome

Sequences

PubMed Search for Enterococcus faecalis E1Sol

Related Genomes