Enterococcus faecalis HIP11704

Broad Institute

GC Content: 37.1%, Released Date: May 20, 2009 #18032

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAN01000001
1.3 KB
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whole genome shotgun sequence
NZ_ACAN01000002
652 bytes
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whole genome shotgun sequence
NZ_ACAN01000003
920 bytes
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whole genome shotgun sequence
NZ_ACAN01000004
1.9 KB
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whole genome shotgun sequence
NZ_ACAN01000005
613 bytes
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whole genome shotgun sequence
NZ_ACAN01000006
632 bytes
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whole genome shotgun sequence
NZ_ACAN01000007
547 bytes
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whole genome shotgun sequence
NZ_ACAN01000008
759 bytes
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whole genome shotgun sequence
NZ_ACAN01000009
28.2 KB
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whole genome shotgun sequence
NZ_ACAN01000010
676 bytes
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whole genome shotgun sequence
NZ_ACAN01000011
103.7 KB
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whole genome shotgun sequence
NZ_ACAN01000012
4.6 KB
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whole genome shotgun sequence
NZ_ACAN01000013
3.2 KB
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whole genome shotgun sequence
NZ_ACAN01000014
2.8 KB
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whole genome shotgun sequence
NZ_ACAN01000015
27.2 KB
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whole genome shotgun sequence
NZ_ACAN01000016
1.1 KB
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whole genome shotgun sequence
NZ_ACAN01000017
12.9 KB
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whole genome shotgun sequence
NZ_ACAN01000018
3.4 KB
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whole genome shotgun sequence
NZ_ACAN01000019
6.4 KB
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whole genome shotgun sequence
NZ_ACAN01000020
909 bytes
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whole genome shotgun sequence
NZ_ACAN01000021
565 bytes
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whole genome shotgun sequence
NZ_ACAN01000022
500 bytes
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whole genome shotgun sequence
NZ_ACAN01000023
523 bytes
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whole genome shotgun sequence
NZ_ACAN01000024
750 bytes
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whole genome shotgun sequence
NZ_ACAN01000025
1.0 KB
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whole genome shotgun sequence
NZ_ACAN01000026
1017 bytes
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whole genome shotgun sequence
NZ_ACAN01000027
33.1 KB
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whole genome shotgun sequence
NZ_ACAN01000028
73.0 KB
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whole genome shotgun sequence
NZ_ACAN01000029
14.4 KB
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whole genome shotgun sequence
NZ_ACAN01000030
25.4 KB
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whole genome shotgun sequence
NZ_ACAN01000031
40.4 KB
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whole genome shotgun sequence
NZ_ACAN01000032
8.4 KB
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whole genome shotgun sequence
NZ_ACAN01000033
120.5 KB
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whole genome shotgun sequence
NZ_ACAN01000034
40.0 KB
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whole genome shotgun sequence
NZ_ACAN01000035
35.7 KB
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whole genome shotgun sequence
NZ_ACAN01000036
23.9 KB
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whole genome shotgun sequence
NZ_ACAN01000037
134.7 KB
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whole genome shotgun sequence
NZ_ACAN01000038
1013 bytes
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whole genome shotgun sequence
NZ_ACAN01000039
3.8 KB
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whole genome shotgun sequence
NZ_ACAN01000040
3.3 KB
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whole genome shotgun sequence
NZ_ACAN01000041
1.9 KB
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whole genome shotgun sequence
NZ_ACAN01000042
1.3 KB
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whole genome shotgun sequence
NZ_ACAN01000043
1.4 KB
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whole genome shotgun sequence
NZ_ACAN01000044
4.0 KB
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whole genome shotgun sequence
NZ_ACAN01000045
1.9 KB
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whole genome shotgun sequence
NZ_ACAN01000046
6.9 KB
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whole genome shotgun sequence
NZ_ACAN01000047
12.9 KB
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whole genome shotgun sequence
NZ_ACAN01000048
6.7 KB
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whole genome shotgun sequence
NZ_ACAN01000049
3.9 KB
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whole genome shotgun sequence
NZ_ACAN01000050
8.3 KB
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whole genome shotgun sequence
NZ_ACAN01000051
1.4 KB
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whole genome shotgun sequence
NZ_ACAN01000052
1.3 KB
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whole genome shotgun sequence
NZ_ACAN01000053
747 bytes
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whole genome shotgun sequence
NZ_ACAN01000054
8.9 KB
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whole genome shotgun sequence
NZ_ACAN01000055
1.1 KB
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whole genome shotgun sequence
NZ_ACAN01000056
1.5 KB
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whole genome shotgun sequence
NZ_ACAN01000057
1.4 KB
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whole genome shotgun sequence
NZ_ACAN01000058
538 bytes
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whole genome shotgun sequence
NZ_ACAN01000059
822 bytes
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whole genome shotgun sequence
NZ_ACAN01000060
810 bytes
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whole genome shotgun sequence
NZ_ACAN01000061
25.1 KB
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whole genome shotgun sequence
NZ_ACAN01000062
653 bytes
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whole genome shotgun sequence
NZ_ACAN01000063
625 bytes
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whole genome shotgun sequence
NZ_ACAN01000064
19.5 KB
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whole genome shotgun sequence
NZ_ACAN01000065
51.8 KB
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whole genome shotgun sequence
NZ_ACAN01000066
32.4 KB
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whole genome shotgun sequence
NZ_ACAN01000067
15.0 KB
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whole genome shotgun sequence
NZ_ACAN01000068
55.5 KB
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whole genome shotgun sequence
NZ_ACAN01000069
45.4 KB
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whole genome shotgun sequence
NZ_ACAN01000070
46.5 KB
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whole genome shotgun sequence
NZ_ACAN01000071
13.0 KB
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whole genome shotgun sequence
NZ_ACAN01000072
183.1 KB
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whole genome shotgun sequence
NZ_ACAN01000073
16.4 KB
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whole genome shotgun sequence
NZ_ACAN01000074
12.0 KB
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whole genome shotgun sequence
NZ_ACAN01000075
37.4 KB
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whole genome shotgun sequence
NZ_ACAN01000076
46.8 KB
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whole genome shotgun sequence
NZ_ACAN01000077
3.2 KB
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whole genome shotgun sequence
NZ_ACAN01000078
1.8 KB
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whole genome shotgun sequence
NZ_ACAN01000079
13.3 KB
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whole genome shotgun sequence
NZ_ACAN01000080
14.4 KB
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whole genome shotgun sequence
NZ_ACAN01000081
26.7 KB
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whole genome shotgun sequence
NZ_ACAN01000082
52.9 KB
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whole genome shotgun sequence
NZ_ACAN01000083
148.4 KB
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whole genome shotgun sequence
NZ_ACAN01000084
1.3 KB
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whole genome shotgun sequence
NZ_ACAN01000085
698 bytes
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whole genome shotgun sequence
NZ_ACAN01000086
510 bytes
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whole genome shotgun sequence
NZ_ACAN01000087
4.7 KB
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whole genome shotgun sequence
NZ_ACAN01000088
55.0 KB
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whole genome shotgun sequence
NZ_ACAN01000089
54.1 KB
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whole genome shotgun sequence
NZ_ACAN01000090
54.8 KB
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whole genome shotgun sequence
NZ_ACAN01000091
14.9 KB
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whole genome shotgun sequence
NZ_ACAN01000092
9.6 KB
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whole genome shotgun sequence
NZ_ACAN01000093
3.6 KB
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whole genome shotgun sequence
NZ_ACAN01000094
24.3 KB
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whole genome shotgun sequence
NZ_ACAN01000095
3.6 KB
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whole genome shotgun sequence
NZ_ACAN01000096
29.6 KB
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whole genome shotgun sequence
NZ_ACAN01000097
69.7 KB
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whole genome shotgun sequence
NZ_ACAN01000098
2.3 KB
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whole genome shotgun sequence
NZ_ACAN01000099
2.4 KB
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whole genome shotgun sequence
NZ_ACAN01000100
36.6 KB
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whole genome shotgun sequence
NZ_ACAN01000101
20.8 KB
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whole genome shotgun sequence
NZ_ACAN01000102
15.0 KB
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whole genome shotgun sequence
NZ_ACAN01000103
25.1 KB
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whole genome shotgun sequence
NZ_ACAN01000104
18.0 KB
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whole genome shotgun sequence
NZ_ACAN01000105
7.4 KB
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whole genome shotgun sequence
NZ_ACAN01000106
1.3 KB
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whole genome shotgun sequence
NZ_ACAN01000107
832 bytes
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whole genome shotgun sequence
NZ_ACAN01000108
16.2 KB
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whole genome shotgun sequence
NZ_ACAN01000109
6.1 KB
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whole genome shotgun sequence
NZ_ACAN01000110
1.0 KB
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whole genome shotgun sequence
NZ_ACAN01000111
1.0 KB
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whole genome shotgun sequence
NZ_ACAN01000112
1.1 KB
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whole genome shotgun sequence
NZ_ACAN01000113
589 bytes
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whole genome shotgun sequence
NZ_ACAN01000114
1.0 KB
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whole genome shotgun sequence
NZ_ACAN01000115
566 bytes
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whole genome shotgun sequence
NZ_ACAN01000116
1.2 KB
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whole genome shotgun sequence
NZ_ACAN01000117
2.4 KB
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whole genome shotgun sequence
NZ_ACAN01000118
15.3 KB
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whole genome shotgun sequence
NZ_ACAN01000119
11.4 KB
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whole genome shotgun sequence
NZ_ACAN01000120
113.4 KB
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whole genome shotgun sequence
NZ_ACAN01000121
57.9 KB
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whole genome shotgun sequence
NZ_ACAN01000122
59.7 KB
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whole genome shotgun sequence
NZ_ACAN01000123
7.4 KB
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whole genome shotgun sequence
NZ_ACAN01000124
53.6 KB
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whole genome shotgun sequence
NZ_ACAN01000125
59.8 KB
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whole genome shotgun sequence
NZ_ACAN01000126
25.6 KB
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whole genome shotgun sequence
NZ_ACAN01000127
19.4 KB
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whole genome shotgun sequence
NZ_ACAN01000128
5.6 KB
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whole genome shotgun sequence
NZ_ACAN01000129
127.5 KB
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whole genome shotgun sequence
NZ_ACAN01000130
1.2 KB
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whole genome shotgun sequence
NZ_ACAN01000131
40.8 KB
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whole genome shotgun sequence
NZ_ACAN01000132
42.1 KB
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whole genome shotgun sequence
NZ_ACAN01000133
32.3 KB
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whole genome shotgun sequence
NZ_ACAN01000134
17.9 KB
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whole genome shotgun sequence
NZ_ACAN01000135
28.2 KB
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whole genome shotgun sequence
NZ_ACAN01000136
55.6 KB
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whole genome shotgun sequence
NZ_ACAN01000137
37.2 KB
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whole genome shotgun sequence
NZ_ACAN01000138
19.2 KB
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whole genome shotgun sequence
NZ_ACAN01000139
555 bytes
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whole genome shotgun sequence
NZ_ACAN01000140
525 bytes
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whole genome shotgun sequence
NZ_ACAN01000141
1.2 KB
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whole genome shotgun sequence
NZ_ACAN01000142
33.1 KB
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whole genome shotgun sequence
NZ_ACAN01000143
9.2 KB
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Taxonomy

External Links

Enterococcus faecalis HIP11704

Search Genome

Sequences

PubMed Search for Enterococcus faecalis HIP11704

Related Genomes