Enterococcus faecalis Merz96

Broad Institute

Released Date: June 12, 2009 #18034

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACAM01000001
1.5 KB
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whole genome shotgun sequence
NZ_ACAM01000002
613 bytes
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whole genome shotgun sequence
NZ_ACAM01000003
786 bytes
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whole genome shotgun sequence
NZ_ACAM01000004
810 bytes
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whole genome shotgun sequence
NZ_ACAM01000005
1.6 KB
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whole genome shotgun sequence
NZ_ACAM01000006
5.1 KB
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whole genome shotgun sequence
NZ_ACAM01000007
7.5 KB
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whole genome shotgun sequence
NZ_ACAM01000008
598 bytes
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whole genome shotgun sequence
NZ_ACAM01000009
19.6 KB
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whole genome shotgun sequence
NZ_ACAM01000010
12.7 KB
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whole genome shotgun sequence
NZ_ACAM01000011
68.7 KB
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whole genome shotgun sequence
NZ_ACAM01000012
6.6 KB
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whole genome shotgun sequence
NZ_ACAM01000013
36.8 KB
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whole genome shotgun sequence
NZ_ACAM01000014
26.6 KB
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whole genome shotgun sequence
NZ_ACAM01000015
3.6 KB
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whole genome shotgun sequence
NZ_ACAM01000016
1.7 KB
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whole genome shotgun sequence
NZ_ACAM01000017
25.1 KB
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whole genome shotgun sequence
NZ_ACAM01000018
15.0 KB
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whole genome shotgun sequence
NZ_ACAM01000019
67.0 KB
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whole genome shotgun sequence
NZ_ACAM01000020
39.7 KB
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whole genome shotgun sequence
NZ_ACAM01000021
29.6 KB
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whole genome shotgun sequence
NZ_ACAM01000022
3.1 KB
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whole genome shotgun sequence
NZ_ACAM01000023
24.3 KB
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whole genome shotgun sequence
NZ_ACAM01000024
4.3 KB
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whole genome shotgun sequence
NZ_ACAM01000025
10.1 KB
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whole genome shotgun sequence
NZ_ACAM01000026
53.6 KB
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whole genome shotgun sequence
NZ_ACAM01000027
49.3 KB
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whole genome shotgun sequence
NZ_ACAM01000028
34.6 KB
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whole genome shotgun sequence
NZ_ACAM01000029
43.7 KB
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whole genome shotgun sequence
NZ_ACAM01000030
48.6 KB
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whole genome shotgun sequence
NZ_ACAM01000031
21.7 KB
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whole genome shotgun sequence
NZ_ACAM01000032
2.2 KB
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whole genome shotgun sequence
NZ_ACAM01000033
48.3 KB
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whole genome shotgun sequence
NZ_ACAM01000034
1.8 KB
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whole genome shotgun sequence
NZ_ACAM01000035
3.2 KB
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whole genome shotgun sequence
NZ_ACAM01000036
1.3 KB
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whole genome shotgun sequence
NZ_ACAM01000037
18.2 KB
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whole genome shotgun sequence
NZ_ACAM01000038
78.1 KB
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whole genome shotgun sequence
NZ_ACAM01000039
26.7 KB
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whole genome shotgun sequence
NZ_ACAM01000040
8.1 KB
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whole genome shotgun sequence
NZ_ACAM01000041
2.9 KB
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whole genome shotgun sequence
NZ_ACAM01000042
1.7 KB
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whole genome shotgun sequence
NZ_ACAM01000043
18.9 KB
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whole genome shotgun sequence
NZ_ACAM01000044
2.5 KB
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whole genome shotgun sequence
NZ_ACAM01000045
29.6 KB
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whole genome shotgun sequence
NZ_ACAM01000046
79.0 KB
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whole genome shotgun sequence
NZ_ACAM01000047
72.7 KB
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whole genome shotgun sequence
NZ_ACAM01000048
4.2 KB
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whole genome shotgun sequence
NZ_ACAM01000049
37.2 KB
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whole genome shotgun sequence
NZ_ACAM01000050
1.1 KB
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whole genome shotgun sequence
NZ_ACAM01000051
528 bytes
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whole genome shotgun sequence
NZ_ACAM01000052
885 bytes
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whole genome shotgun sequence
NZ_ACAM01000053
885 bytes
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whole genome shotgun sequence
NZ_ACAM01000054
842 bytes
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whole genome shotgun sequence
NZ_ACAM01000055
126.7 KB
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whole genome shotgun sequence
NZ_ACAM01000056
48.8 KB
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whole genome shotgun sequence
NZ_ACAM01000057
2.1 KB
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whole genome shotgun sequence
NZ_ACAM01000058
25.1 KB
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whole genome shotgun sequence
NZ_ACAM01000059
76.5 KB
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whole genome shotgun sequence
NZ_ACAM01000060
28.8 KB
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whole genome shotgun sequence
NZ_ACAM01000061
42.7 KB
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whole genome shotgun sequence
NZ_ACAM01000062
8.2 KB
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whole genome shotgun sequence
NZ_ACAM01000063
29.2 KB
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whole genome shotgun sequence
NZ_ACAM01000064
54.8 KB
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whole genome shotgun sequence
NZ_ACAM01000065
130.0 KB
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whole genome shotgun sequence
NZ_ACAM01000066
20.2 KB
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whole genome shotgun sequence
NZ_ACAM01000067
15.2 KB
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whole genome shotgun sequence
NZ_ACAM01000068
788 bytes
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whole genome shotgun sequence
NZ_ACAM01000069
34.7 KB
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whole genome shotgun sequence
NZ_ACAM01000070
23.5 KB
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whole genome shotgun sequence
NZ_ACAM01000071
98.6 KB
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whole genome shotgun sequence
NZ_ACAM01000072
35.5 KB
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whole genome shotgun sequence
NZ_ACAM01000073
6.8 KB
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whole genome shotgun sequence
NZ_ACAM01000074
30.0 KB
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whole genome shotgun sequence
NZ_ACAM01000075
22.0 KB
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whole genome shotgun sequence
NZ_ACAM01000076
46.4 KB
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whole genome shotgun sequence
NZ_ACAM01000077
8.9 KB
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whole genome shotgun sequence
NZ_ACAM01000078
106.5 KB
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whole genome shotgun sequence
NZ_ACAM01000079
6.2 KB
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whole genome shotgun sequence
NZ_ACAM01000080
36.9 KB
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whole genome shotgun sequence
NZ_ACAM01000081
8.8 KB
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whole genome shotgun sequence
NZ_ACAM01000082
102.0 KB
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whole genome shotgun sequence
NZ_ACAM01000083
53.4 KB
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whole genome shotgun sequence
NZ_ACAM01000084
35.8 KB
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whole genome shotgun sequence
NZ_ACAM01000085
24.2 KB
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whole genome shotgun sequence
NZ_ACAM01000086
25.5 KB
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whole genome shotgun sequence
NZ_ACAM01000087
19.4 KB
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whole genome shotgun sequence
NZ_ACAM01000088
5.5 KB
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whole genome shotgun sequence
NZ_ACAM01000089
46.8 KB
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whole genome shotgun sequence
NZ_ACAM01000090
24.3 KB
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whole genome shotgun sequence
NZ_ACAM01000091
33.4 KB
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whole genome shotgun sequence
NZ_ACAM01000092
21.1 KB
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whole genome shotgun sequence
NZ_ACAM01000093
84.0 KB
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whole genome shotgun sequence
NZ_ACAM01000094
64.4 KB
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whole genome shotgun sequence
NZ_ACAM01000095
18.8 KB
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whole genome shotgun sequence
NZ_ACAM01000096
76.2 KB
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whole genome shotgun sequence
NZ_ACAM01000097
22.7 KB
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whole genome shotgun sequence
NZ_ACAM01000098
3.5 KB
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whole genome shotgun sequence
NZ_ACAM01000099
39.4 KB
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whole genome shotgun sequence
NZ_ACAM01000100
44.8 KB
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whole genome shotgun sequence
NZ_ACAM01000101
13.0 KB
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whole genome shotgun sequence
NZ_ACAM01000102
12.1 KB
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whole genome shotgun sequence
NZ_ACAM01000103
9.7 KB
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whole genome shotgun sequence
NZ_ACAM01000104
1.9 KB
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whole genome shotgun sequence
NZ_ACAM01000105
2.2 KB
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whole genome shotgun sequence
NZ_ACAM01000106
3.6 KB
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Taxonomy

External Links

Enterococcus faecalis Merz96

Search Genome

Sequences

PubMed Search for Enterococcus faecalis Merz96

Related Genomes