Enterococcus faecalis TUSoD Ef11

J. Craig Venter Institute

Genome Size: 3.0 megabases, GC Content: 37.6%, Released Date: June 3, 2009 #18040

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACOX01000001
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACOX01000002
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACOX01000003
46.9 KB
46 CDS

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whole genome shotgun sequence
NZ_ACOX01000004
4.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ACOX01000005
12.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACOX01000006
23.1 KB
29 CDS

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whole genome shotgun sequence
NZ_ACOX01000007
74.1 KB
76 CDS

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whole genome shotgun sequence
NZ_ACOX01000008
33.2 KB
29 CDS

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whole genome shotgun sequence
NZ_ACOX01000009
21.9 KB
25 CDS

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whole genome shotgun sequence
NZ_ACOX01000010
18.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ACOX01000011
15.5 KB
14 CDS

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whole genome shotgun sequence
NZ_ACOX01000012
4.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACOX01000013
24.1 KB
26 CDS

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whole genome shotgun sequence
NZ_ACOX01000014
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACOX01000015
116.1 KB
107 CDS

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whole genome shotgun sequence
NZ_ACOX01000016
72.8 KB
67 CDS

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whole genome shotgun sequence
NZ_ACOX01000017
3.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACOX01000018
32.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ACOX01000019
95.4 KB
93 CDS

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whole genome shotgun sequence
NZ_ACOX01000020
46.7 KB
44 CDS

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whole genome shotgun sequence
NZ_ACOX01000021
4.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACOX01000022
60.5 KB
61 CDS

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whole genome shotgun sequence
NZ_ACOX01000023
519 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000024
11.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACOX01000025
150.8 KB
151 CDS

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whole genome shotgun sequence
NZ_ACOX01000026
83.8 KB
80 CDS

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whole genome shotgun sequence
NZ_ACOX01000027
42.1 KB
42 CDS

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whole genome shotgun sequence
NZ_ACOX01000028
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACOX01000029
75.5 KB
75 CDS

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whole genome shotgun sequence
NZ_ACOX01000030
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000031
13.3 KB
12 CDS

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whole genome shotgun sequence
NZ_ACOX01000032
39.0 KB
39 CDS

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whole genome shotgun sequence
NZ_ACOX01000033
19.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ACOX01000034
37.7 KB
33 CDS

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whole genome shotgun sequence
NZ_ACOX01000035
132.6 KB
126 CDS

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whole genome shotgun sequence
NZ_ACOX01000036
614 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACOX01000037
5.1 KB
5 CDS

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whole genome shotgun sequence
NZ_ACOX01000038
24.3 KB
20 CDS

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whole genome shotgun sequence
NZ_ACOX01000039
889 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000040
7.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ACOX01000041
26.2 KB
20 CDS

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whole genome shotgun sequence
NZ_ACOX01000042
588 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000043
4.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACOX01000044
48.3 KB
66 CDS

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whole genome shotgun sequence
NZ_ACOX01000045
647 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000046
17.1 KB
22 CDS

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whole genome shotgun sequence
NZ_ACOX01000047
704 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000048
29.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ACOX01000049
59.1 KB
67 CDS

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whole genome shotgun sequence
NZ_ACOX01000050
20.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ACOX01000051
90.2 KB
90 CDS

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whole genome shotgun sequence
NZ_ACOX01000052
25.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ACOX01000053
712 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACOX01000054
7.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ACOX01000055
101.4 KB
87 CDS

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whole genome shotgun sequence
NZ_ACOX01000056
145.6 KB
152 CDS

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whole genome shotgun sequence
NZ_ACOX01000057
15.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ACOX01000058
8.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ACOX01000059
121.9 KB
121 CDS

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whole genome shotgun sequence
NZ_ACOX01000060
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000061
19.9 KB
24 CDS

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whole genome shotgun sequence
NZ_ACOX01000062
83.8 KB
79 CDS

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whole genome shotgun sequence
NZ_ACOX01000063
508 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000064
46.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ACOX01000065
24.9 KB
26 CDS

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whole genome shotgun sequence
NZ_ACOX01000066
43.5 KB
68 CDS

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whole genome shotgun sequence
NZ_ACOX01000067
7.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ACOX01000068
34.2 KB
33 CDS

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whole genome shotgun sequence
NZ_ACOX01000069
90.4 KB
93 CDS

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whole genome shotgun sequence
NZ_ACOX01000070
45.4 KB
53 CDS

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whole genome shotgun sequence
NZ_ACOX01000071
34.1 KB
33 CDS

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whole genome shotgun sequence
NZ_ACOX01000072
46.3 KB
37 CDS

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whole genome shotgun sequence
NZ_ACOX01000073
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACOX01000074
51.9 KB
47 CDS

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whole genome shotgun sequence
NZ_ACOX01000075
37.6 KB
42 CDS

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whole genome shotgun sequence
NZ_ACOX01000076
548 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOX01000077
694 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACOX01000078
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACOX01000079
72.7 KB
70 CDS

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Taxonomy

External Links

Enterococcus faecalis TUSoD Ef11

Search Genome

Sequences

PubMed Search for Enterococcus faecalis TUSoD Ef11

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