Enterococcus faecium TX1330

Baylor College of Medicine

GC Content: 38.1%, Released Date: March 10, 2009 #18054

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACHL01000001
850 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000002
5.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000003
13.5 KB
16 CDS

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whole genome shotgun sequence
NZ_ACHL01000004
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000005
5.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000006
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000007
7.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHL01000008
10.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHL01000009
13.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ACHL01000010
22.3 KB
28 CDS

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whole genome shotgun sequence
NZ_ACHL01000011
4.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000012
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000013
7.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHL01000014
45.2 KB
56 CDS

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whole genome shotgun sequence
NZ_ACHL01000015
2.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000016
3.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000017
9.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHL01000018
949 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000019
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000020
6.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000021
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000022
13.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHL01000023
13.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHL01000024
36.6 KB
29 CDS

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whole genome shotgun sequence
NZ_ACHL01000025
213 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000026
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000027
614 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000028
949 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000029
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000030
817 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000031
268 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000032
13.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ACHL01000033
6.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000034
27.8 KB
26 CDS

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whole genome shotgun sequence
NZ_ACHL01000035
13.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ACHL01000036
12.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ACHL01000037
139.9 KB
144 CDS

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whole genome shotgun sequence
NZ_ACHL01000038
52.7 KB
49 CDS

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whole genome shotgun sequence
NZ_ACHL01000039
387 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000040
1.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000041
394 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000042
216 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000043
227 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000044
2.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000045
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000046
370 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000047
433 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000048
683 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000049
265 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000050
382 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000051
674 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000052
746 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000053
209 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000054
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000055
534 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000056
217 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000057
3.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000058
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000059
17.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ACHL01000060
5.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000061
7.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000062
3.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000063
72.5 KB
90 CDS

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whole genome shotgun sequence
NZ_ACHL01000064
55.4 KB
53 CDS

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whole genome shotgun sequence
NZ_ACHL01000065
25.4 KB
28 CDS

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whole genome shotgun sequence
NZ_ACHL01000066
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000067
11.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ACHL01000068
84.2 KB
87 CDS

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whole genome shotgun sequence
NZ_ACHL01000069
10.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHL01000070
27.2 KB
30 CDS

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whole genome shotgun sequence
NZ_ACHL01000071
31.1 KB
29 CDS

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whole genome shotgun sequence
NZ_ACHL01000072
34.8 KB
36 CDS

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whole genome shotgun sequence
NZ_ACHL01000073
4.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000074
10.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ACHL01000075
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000076
10.5 KB
7 CDS

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whole genome shotgun sequence
NZ_ACHL01000077
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000078
4.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000079
3.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000080
25.2 KB
27 CDS

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whole genome shotgun sequence
NZ_ACHL01000081
12.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ACHL01000082
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000083
8.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000084
7.7 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000085
4.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000086
48.8 KB
45 CDS

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whole genome shotgun sequence
NZ_ACHL01000087
48.1 KB
49 CDS

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whole genome shotgun sequence
NZ_ACHL01000088
7.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACHL01000089
7.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ACHL01000090
11.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ACHL01000091
22.4 KB
21 CDS

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whole genome shotgun sequence
NZ_ACHL01000092
41.8 KB
39 CDS

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whole genome shotgun sequence
NZ_ACHL01000093
28.2 KB
30 CDS

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whole genome shotgun sequence
NZ_ACHL01000094
56.8 KB
62 CDS

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whole genome shotgun sequence
NZ_ACHL01000095
47.7 KB
48 CDS

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whole genome shotgun sequence
NZ_ACHL01000096
4.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000097
7.7 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000098
6.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000099
24.3 KB
26 CDS

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whole genome shotgun sequence
NZ_ACHL01000100
11.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHL01000101
14.0 KB
14 CDS

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whole genome shotgun sequence
NZ_ACHL01000102
34.9 KB
39 CDS

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whole genome shotgun sequence
NZ_ACHL01000103
1.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000104
44.2 KB
56 CDS

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whole genome shotgun sequence
NZ_ACHL01000105
63.6 KB
58 CDS

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whole genome shotgun sequence
NZ_ACHL01000106
65.4 KB
64 CDS

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whole genome shotgun sequence
NZ_ACHL01000107
66.6 KB
72 CDS

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whole genome shotgun sequence
NZ_ACHL01000108
49.1 KB
61 CDS

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whole genome shotgun sequence
NZ_ACHL01000109
33.3 KB
39 CDS

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whole genome shotgun sequence
NZ_ACHL01000110
5.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000111
21.0 KB
22 CDS

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whole genome shotgun sequence
NZ_ACHL01000112
70.7 KB
74 CDS

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whole genome shotgun sequence
NZ_ACHL01000113
69.1 KB
78 CDS

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whole genome shotgun sequence
NZ_ACHL01000114
11.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000115
20.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ACHL01000116
32.1 KB
41 CDS

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whole genome shotgun sequence
NZ_ACHL01000117
10.0 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000118
27.8 KB
32 CDS

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whole genome shotgun sequence
NZ_ACHL01000119
14.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHL01000120
5.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000121
5.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHL01000122
14.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ACHL01000123
2.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000124
5.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000125
4.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000126
26.9 KB
31 CDS

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whole genome shotgun sequence
NZ_ACHL01000127
3.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000128
22.2 KB
20 CDS

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whole genome shotgun sequence
NZ_ACHL01000129
27.9 KB
28 CDS

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whole genome shotgun sequence
NZ_ACHL01000130
26.3 KB
27 CDS

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whole genome shotgun sequence
NZ_ACHL01000131
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHL01000132
14.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ACHL01000133
240 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHL01000134
458 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000135
14.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ACHL01000136
17.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ACHL01000137
24.0 KB
25 CDS

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whole genome shotgun sequence
NZ_ACHL01000138
11.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHL01000139
6.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000140
3.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHL01000141
24.6 KB
29 CDS

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whole genome shotgun sequence
NZ_ACHL01000142
35.8 KB
33 CDS

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whole genome shotgun sequence
NZ_ACHL01000143
7.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ACHL01000144
3.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000145
43.2 KB
42 CDS

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whole genome shotgun sequence
NZ_ACHL01000146
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHL01000147
75.4 KB
77 CDS

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whole genome shotgun sequence
NZ_ACHL01000148
552 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHL01000149
21.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ACHL01000150
4.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHL01000151
5.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000152
4.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHL01000153
22.2 KB
20 CDS

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whole genome shotgun sequence
NZ_ACHL01000154
39.2 KB
43 CDS

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whole genome shotgun sequence
NZ_ACHL01000155
30.8 KB
33 CDS

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whole genome shotgun sequence
NZ_ACHL01000156
61.0 KB
48 CDS

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Taxonomy

External Links

Enterococcus faecium TX1330

Search Genome

Sequences

PubMed Search for Enterococcus faecium TX1330

Related Genomes