Epulopiscium sp. 'N.t. morphotype B'

J. Craig Venter Institute

GC Content: 38.1%, Released Date: Aug. 8, 2007 #18056

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABEQ01000001
116.4 KB
71 CDS

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whole genome shotgun sequence
NZ_ABEQ01000002
81.8 KB
63 CDS

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whole genome shotgun sequence
NZ_ABEQ01000003
72.1 KB
62 CDS

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whole genome shotgun sequence
NZ_ABEQ01000004
69.4 KB
59 CDS

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whole genome shotgun sequence
NZ_ABEQ01000005
65.8 KB
63 CDS

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whole genome shotgun sequence
NZ_ABEQ01000006
60.4 KB
52 CDS

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whole genome shotgun sequence
NZ_ABEQ01000007
56.2 KB
45 CDS

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whole genome shotgun sequence
NZ_ABEQ01000008
50.3 KB
38 CDS

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whole genome shotgun sequence
NZ_ABEQ01000009
46.1 KB
43 CDS

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whole genome shotgun sequence
NZ_ABEQ01000010
45.0 KB
26 CDS

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whole genome shotgun sequence
NZ_ABEQ01000011
42.9 KB
58 CDS

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whole genome shotgun sequence
NZ_ABEQ01000012
42.4 KB
38 CDS

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whole genome shotgun sequence
NZ_ABEQ01000013
41.8 KB
23 CDS

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whole genome shotgun sequence
NZ_ABEQ01000014
41.4 KB
44 CDS

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whole genome shotgun sequence
NZ_ABEQ01000015
39.4 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000016
39.4 KB
38 CDS

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whole genome shotgun sequence
NZ_ABEQ01000017
39.0 KB
35 CDS

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whole genome shotgun sequence
NZ_ABEQ01000018
38.7 KB
37 CDS

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whole genome shotgun sequence
NZ_ABEQ01000019
37.4 KB
37 CDS

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whole genome shotgun sequence
NZ_ABEQ01000020
37.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ABEQ01000021
35.8 KB
26 CDS

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whole genome shotgun sequence
NZ_ABEQ01000022
35.6 KB
25 CDS

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whole genome shotgun sequence
NZ_ABEQ01000023
35.6 KB
28 CDS

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whole genome shotgun sequence
NZ_ABEQ01000024
33.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ABEQ01000025
33.2 KB
27 CDS

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whole genome shotgun sequence
NZ_ABEQ01000026
32.1 KB
47 CDS

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whole genome shotgun sequence
NZ_ABEQ01000027
31.0 KB
28 CDS

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whole genome shotgun sequence
NZ_ABEQ01000028
29.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEQ01000029
29.4 KB
32 CDS

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whole genome shotgun sequence
NZ_ABEQ01000030
29.1 KB
30 CDS

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whole genome shotgun sequence
NZ_ABEQ01000031
28.7 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEQ01000032
28.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ABEQ01000033
27.9 KB
35 CDS

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whole genome shotgun sequence
NZ_ABEQ01000034
27.6 KB
28 CDS

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whole genome shotgun sequence
NZ_ABEQ01000035
27.1 KB
25 CDS

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whole genome shotgun sequence
NZ_ABEQ01000036
26.9 KB
17 CDS

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whole genome shotgun sequence
NZ_ABEQ01000037
26.7 KB
26 CDS

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whole genome shotgun sequence
NZ_ABEQ01000038
26.7 KB
21 CDS

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whole genome shotgun sequence
NZ_ABEQ01000039
26.7 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEQ01000040
26.3 KB
27 CDS

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whole genome shotgun sequence
NZ_ABEQ01000041
26.1 KB
7 CDS

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whole genome shotgun sequence
NZ_ABEQ01000042
25.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ABEQ01000043
25.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ABEQ01000044
24.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ABEQ01000045
24.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ABEQ01000046
24.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ABEQ01000047
24.0 KB
17 CDS

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whole genome shotgun sequence
NZ_ABEQ01000048
23.4 KB
21 CDS

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whole genome shotgun sequence
NZ_ABEQ01000049
23.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEQ01000050
22.7 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEQ01000051
22.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ABEQ01000052
22.4 KB
14 CDS

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whole genome shotgun sequence
NZ_ABEQ01000053
22.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ABEQ01000054
21.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ABEQ01000055
21.6 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000056
21.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEQ01000057
20.9 KB
22 CDS

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whole genome shotgun sequence
NZ_ABEQ01000058
20.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ABEQ01000059
20.6 KB
23 CDS

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whole genome shotgun sequence
NZ_ABEQ01000060
20.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ABEQ01000061
20.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ABEQ01000062
19.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ABEQ01000063
19.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEQ01000064
19.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000065
18.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000066
18.1 KB
21 CDS

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whole genome shotgun sequence
NZ_ABEQ01000067
17.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000068
17.8 KB
8 CDS

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whole genome shotgun sequence
NZ_ABEQ01000069
17.7 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000070
17.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000071
16.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000072
16.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ABEQ01000073
16.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ABEQ01000074
16.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ABEQ01000075
16.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ABEQ01000076
15.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000077
15.4 KB
14 CDS

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whole genome shotgun sequence
NZ_ABEQ01000078
15.3 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000079
15.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEQ01000080
15.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ABEQ01000081
15.1 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000082
14.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ABEQ01000083
14.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000084
14.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABEQ01000085
13.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ABEQ01000086
13.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ABEQ01000087
12.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ABEQ01000088
12.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ABEQ01000089
12.5 KB
10 CDS

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whole genome shotgun sequence
NZ_ABEQ01000090
12.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ABEQ01000091
12.1 KB
5 CDS

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whole genome shotgun sequence
NZ_ABEQ01000092
11.8 KB
6 CDS

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Taxonomy

External Links

Epulopiscium sp. 'N.t. morphotype B'

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Sequences

PubMed Search for Epulopiscium sp. 'N.t. morphotype B'

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