Erysipelothrix rhusiopathiae ATCC 19414

BCM

GC Content: 36.4%, Released Date: April 27, 2009 #18057

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACLK01000001
47.4 KB
48 CDS

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whole genome shotgun sequence
NZ_ACLK01000002
26.7 KB
26 CDS

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whole genome shotgun sequence
NZ_ACLK01000003
195.3 KB
193 CDS

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whole genome shotgun sequence
NZ_ACLK01000004
83.1 KB
78 CDS

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whole genome shotgun sequence
NZ_ACLK01000005
4.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ACLK01000006
14.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ACLK01000007
8.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACLK01000008
201.0 KB
195 CDS

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whole genome shotgun sequence
NZ_ACLK01000009
31.4 KB
29 CDS

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whole genome shotgun sequence
NZ_ACLK01000010
65.0 KB
68 CDS

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whole genome shotgun sequence
NZ_ACLK01000011
18.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ACLK01000012
8.5 KB
11 CDS

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whole genome shotgun sequence
NZ_ACLK01000013
25.8 KB
23 CDS

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whole genome shotgun sequence
NZ_ACLK01000014
7.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ACLK01000015
31.6 KB
31 CDS

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whole genome shotgun sequence
NZ_ACLK01000016
188.8 KB
169 CDS

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whole genome shotgun sequence
NZ_ACLK01000017
660 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACLK01000018
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACLK01000019
632 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLK01000020
924 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACLK01000021
5.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACLK01000022
207.5 KB
211 CDS

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whole genome shotgun sequence
NZ_ACLK01000023
45.3 KB
45 CDS

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whole genome shotgun sequence
NZ_ACLK01000024
52.0 KB
53 CDS

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whole genome shotgun sequence
NZ_ACLK01000025
59.9 KB
52 CDS

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whole genome shotgun sequence
NZ_ACLK01000026
20.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ACLK01000027
12.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ACLK01000028
105.6 KB
103 CDS

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whole genome shotgun sequence
NZ_ACLK01000029
182.7 KB
199 CDS

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whole genome shotgun sequence
NZ_ACLK01000030
25.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ACLK01000031
759 bytes
2 CDS

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Taxonomy

External Links

Erysipelothrix rhusiopathiae ATCC 19414

Search Genome

Sequences

PubMed Search for Erysipelothrix rhusiopathiae ATCC 19414

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