Escherichia albertii TW07627

J. Craig Venter Institute

GC Content: 49.9%, Released Date: March 3, 2008 #18060

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABKX01000001
763.3 KB
734 CDS

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whole genome shotgun sequence
NZ_ABKX01000002
638.0 KB
616 CDS

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whole genome shotgun sequence
NZ_ABKX01000003
526.0 KB
488 CDS

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whole genome shotgun sequence
NZ_ABKX01000004
385.9 KB
358 CDS

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whole genome shotgun sequence
NZ_ABKX01000005
374.3 KB
364 CDS

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whole genome shotgun sequence
NZ_ABKX01000006
317.0 KB
298 CDS

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whole genome shotgun sequence
NZ_ABKX01000007
262.3 KB
258 CDS

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whole genome shotgun sequence
NZ_ABKX01000008
213.3 KB
218 CDS

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whole genome shotgun sequence
NZ_ABKX01000009
196.9 KB
202 CDS

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whole genome shotgun sequence
NZ_ABKX01000010
124.3 KB
126 CDS

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whole genome shotgun sequence
NZ_ABKX01000011
123.6 KB
141 CDS

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whole genome shotgun sequence
NZ_ABKX01000012
116.5 KB
108 CDS

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whole genome shotgun sequence
NZ_ABKX01000013
95.7 KB
86 CDS

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whole genome shotgun sequence
NZ_ABKX01000014
94.0 KB
90 CDS

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whole genome shotgun sequence
NZ_ABKX01000015
64.3 KB
54 CDS

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whole genome shotgun sequence
NZ_ABKX01000016
55.1 KB
56 CDS

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whole genome shotgun sequence
NZ_ABKX01000017
54.9 KB
62 CDS

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whole genome shotgun sequence
NZ_ABKX01000018
46.4 KB
47 CDS

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whole genome shotgun sequence
NZ_ABKX01000019
31.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ABKX01000020
17.5 KB
6 CDS

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whole genome shotgun sequence
NZ_ABKX01000021
15.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ABKX01000022
7.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ABKX01000023
7.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABKX01000024
6.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKX01000025
6.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ABKX01000026
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000027
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000028
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000029
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000030
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000031
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000032
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000033
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABKX01000034
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000035
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000036
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000037
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000038
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000039
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000040
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000041
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000042
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000043
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000044
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000045
984 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000046
977 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000047
973 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000048
932 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000049
923 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000050
919 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000051
901 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000052
891 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000053
891 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000054
846 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000055
840 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000056
821 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000057
817 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000058
809 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000059
789 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000060
767 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000061
749 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKX01000062
726 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000063
626 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABKX01000064
623 bytes
0 CDS

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Taxonomy

External Links

Escherichia albertii TW07627

Search Genome

Sequences

PubMed Search for Escherichia albertii TW07627

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