Escherichia coli E110019

TIGR

Genome Size: 5.0 megabases, GC Content: 50.7%, Released Date: Sept. 7, 2005 #18066

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAJW02000001
370.8 KB
341 CDS

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whole genome shotgun sequence
NZ_AAJW02000002
289.2 KB
290 CDS

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whole genome shotgun sequence
NZ_AAJW02000003
272.0 KB
253 CDS

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whole genome shotgun sequence
NZ_AAJW02000004
204.2 KB
182 CDS

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whole genome shotgun sequence
NZ_AAJW02000005
192.2 KB
171 CDS

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whole genome shotgun sequence
NZ_AAJW02000006
178.1 KB
168 CDS

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whole genome shotgun sequence
NZ_AAJW02000007
170.3 KB
157 CDS

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whole genome shotgun sequence
NZ_AAJW02000008
165.6 KB
142 CDS

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whole genome shotgun sequence
NZ_AAJW02000009
154.1 KB
144 CDS

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whole genome shotgun sequence
NZ_AAJW02000010
144.1 KB
141 CDS

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whole genome shotgun sequence
NZ_AAJW02000011
138.6 KB
138 CDS

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whole genome shotgun sequence
NZ_AAJW02000012
120.1 KB
111 CDS

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whole genome shotgun sequence
NZ_AAJW02000013
107.1 KB
107 CDS

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whole genome shotgun sequence
NZ_AAJW02000014
100.7 KB
82 CDS

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whole genome shotgun sequence
NZ_AAJW02000015
99.6 KB
96 CDS

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whole genome shotgun sequence
NZ_AAJW02000016
93.5 KB
107 CDS

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whole genome shotgun sequence
NZ_AAJW02000017
89.2 KB
92 CDS

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whole genome shotgun sequence
NZ_AAJW02000018
86.3 KB
90 CDS

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whole genome shotgun sequence
NZ_AAJW02000019
83.9 KB
69 CDS

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whole genome shotgun sequence
NZ_AAJW02000020
82.9 KB
77 CDS

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whole genome shotgun sequence
NZ_AAJW02000021
75.9 KB
75 CDS

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whole genome shotgun sequence
NZ_AAJW02000022
74.1 KB
70 CDS

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whole genome shotgun sequence
NZ_AAJW02000023
73.6 KB
84 CDS

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whole genome shotgun sequence
NZ_AAJW02000024
65.8 KB
58 CDS

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whole genome shotgun sequence
NZ_AAJW02000025
64.6 KB
74 CDS

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whole genome shotgun sequence
NZ_AAJW02000026
63.5 KB
62 CDS

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whole genome shotgun sequence
NZ_AAJW02000027
61.8 KB
58 CDS

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whole genome shotgun sequence
NZ_AAJW02000028
59.7 KB
60 CDS

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whole genome shotgun sequence
NZ_AAJW02000029
57.8 KB
58 CDS

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whole genome shotgun sequence
NZ_AAJW02000030
57.1 KB
65 CDS

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whole genome shotgun sequence
NZ_AAJW02000031
56.8 KB
44 CDS

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whole genome shotgun sequence
NZ_AAJW02000032
56.5 KB
54 CDS

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whole genome shotgun sequence
NZ_AAJW02000033
54.8 KB
39 CDS

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whole genome shotgun sequence
NZ_AAJW02000034
54.0 KB
57 CDS

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whole genome shotgun sequence
NZ_AAJW02000035
51.6 KB
38 CDS

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whole genome shotgun sequence
NZ_AAJW02000036
46.1 KB
42 CDS

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whole genome shotgun sequence
NZ_AAJW02000037
45.1 KB
37 CDS

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whole genome shotgun sequence
NZ_AAJW02000038
43.3 KB
45 CDS

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whole genome shotgun sequence
NZ_AAJW02000039
41.4 KB
45 CDS

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whole genome shotgun sequence
NZ_AAJW02000040
40.3 KB
21 CDS

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whole genome shotgun sequence
NZ_AAJW02000041
36.9 KB
33 CDS

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whole genome shotgun sequence
NZ_AAJW02000042
36.8 KB
37 CDS

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whole genome shotgun sequence
NZ_AAJW02000043
36.2 KB
32 CDS

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whole genome shotgun sequence
NZ_AAJW02000044
33.7 KB
30 CDS

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whole genome shotgun sequence
NZ_AAJW02000045
33.3 KB
30 CDS

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whole genome shotgun sequence
NZ_AAJW02000046
33.0 KB
34 CDS

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whole genome shotgun sequence
NZ_AAJW02000047
31.7 KB
27 CDS

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whole genome shotgun sequence
NZ_AAJW02000048
31.4 KB
32 CDS

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whole genome shotgun sequence
NZ_AAJW02000049
31.1 KB
27 CDS

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whole genome shotgun sequence
NZ_AAJW02000050
29.4 KB
28 CDS

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whole genome shotgun sequence
NZ_AAJW02000051
28.4 KB
28 CDS

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whole genome shotgun sequence
NZ_AAJW02000052
27.5 KB
23 CDS

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whole genome shotgun sequence
NZ_AAJW02000053
27.5 KB
33 CDS

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whole genome shotgun sequence
NZ_AAJW02000054
27.1 KB
33 CDS

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whole genome shotgun sequence
NZ_AAJW02000055
26.2 KB
19 CDS

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whole genome shotgun sequence
NZ_AAJW02000056
26.2 KB
24 CDS

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whole genome shotgun sequence
NZ_AAJW02000057
25.0 KB
22 CDS

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whole genome shotgun sequence
NZ_AAJW02000058
21.6 KB
23 CDS

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whole genome shotgun sequence
NZ_AAJW02000059
21.2 KB
20 CDS

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whole genome shotgun sequence
NZ_AAJW02000060
21.2 KB
18 CDS

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whole genome shotgun sequence
NZ_AAJW02000061
19.5 KB
29 CDS

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whole genome shotgun sequence
NZ_AAJW02000062
19.4 KB
20 CDS

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whole genome shotgun sequence
NZ_AAJW02000063
18.4 KB
17 CDS

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whole genome shotgun sequence
NZ_AAJW02000064
18.4 KB
15 CDS

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whole genome shotgun sequence
NZ_AAJW02000065
17.6 KB
16 CDS

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whole genome shotgun sequence
NZ_AAJW02000066
17.0 KB
18 CDS

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whole genome shotgun sequence
NZ_AAJW02000067
16.5 KB
18 CDS

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whole genome shotgun sequence
NZ_AAJW02000068
15.9 KB
13 CDS

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whole genome shotgun sequence
NZ_AAJW02000069
14.8 KB
14 CDS

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whole genome shotgun sequence
NZ_AAJW02000070
13.5 KB
17 CDS

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whole genome shotgun sequence
NZ_AAJW02000071
11.8 KB
12 CDS

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whole genome shotgun sequence
NZ_AAJW02000072
11.6 KB
17 CDS

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whole genome shotgun sequence
NZ_AAJW02000073
11.1 KB
7 CDS

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whole genome shotgun sequence
NZ_AAJW02000074
10.9 KB
8 CDS

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whole genome shotgun sequence
NZ_AAJW02000075
7.8 KB
11 CDS

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whole genome shotgun sequence
NZ_AAJW02000076
7.8 KB
7 CDS

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whole genome shotgun sequence
NZ_AAJW02000077
6.8 KB
8 CDS

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whole genome shotgun sequence
NZ_AAJW02000078
6.2 KB
5 CDS

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whole genome shotgun sequence
NZ_AAJW02000079
5.9 KB
10 CDS

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whole genome shotgun sequence
NZ_AAJW02000080
5.9 KB
5 CDS

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whole genome shotgun sequence
NZ_AAJW02000081
5.7 KB
3 CDS

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whole genome shotgun sequence
NZ_AAJW02000082
5.5 KB
4 CDS

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whole genome shotgun sequence
NZ_AAJW02000083
5.3 KB
9 CDS

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whole genome shotgun sequence
NZ_AAJW02000084
4.2 KB
7 CDS

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whole genome shotgun sequence
NZ_AAJW02000085
4.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000086
3.8 KB
2 CDS

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whole genome shotgun sequence
NZ_AAJW02000087
3.5 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000088
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAJW02000089
3.1 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000090
3.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000091
3.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000092
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_AAJW02000093
2.9 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000094
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_AAJW02000095
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAJW02000096
2.7 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000097
2.6 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000098
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000099
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAJW02000100
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAJW02000101
2.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000102
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000103
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000104
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000105
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000106
1.7 KB
3 CDS

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whole genome shotgun sequence
NZ_AAJW02000107
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000108
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000109
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000110
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000111
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000112
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000113
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000114
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000115
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000116
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000117
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAJW02000118
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAJW02000119
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000120
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000121
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000122
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAJW02000123
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000124
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000125
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000126
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000127
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000128
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000129
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000130
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000131
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000132
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000133
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000134
1019 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000135
1003 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAJW02000136
1001 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAJW02000137
869 bytes
1 CDS

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Taxonomy

External Links

Escherichia coli E110019

Search Genome

Sequences

PubMed Search for Escherichia coli E110019

Related Genomes