Escherichia coli O157:H7 str. EC4076

J. Craig Venter Institute

GC Content: 50.6%, Released Date: Nov. 8, 2007 #18072

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABHQ01000001
528.6 KB
497 CDS

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whole genome shotgun sequence
NZ_ABHQ01000002
511.8 KB
463 CDS

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whole genome shotgun sequence
NZ_ABHQ01000003
508.9 KB
472 CDS

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whole genome shotgun sequence
NZ_ABHQ01000004
341.6 KB
336 CDS

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whole genome shotgun sequence
NZ_ABHQ01000005
267.6 KB
254 CDS

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whole genome shotgun sequence
NZ_ABHQ01000006
260.4 KB
227 CDS

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whole genome shotgun sequence
NZ_ABHQ01000007
241.5 KB
250 CDS

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whole genome shotgun sequence
NZ_ABHQ01000008
184.2 KB
177 CDS

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whole genome shotgun sequence
NZ_ABHQ01000009
182.1 KB
172 CDS

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whole genome shotgun sequence
NZ_ABHQ01000010
154.4 KB
136 CDS

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whole genome shotgun sequence
NZ_ABHQ01000011
153.5 KB
152 CDS

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whole genome shotgun sequence
NZ_ABHQ01000012
152.3 KB
137 CDS

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whole genome shotgun sequence
NZ_ABHQ01000013
147.0 KB
152 CDS

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whole genome shotgun sequence
NZ_ABHQ01000014
145.6 KB
148 CDS

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whole genome shotgun sequence
NZ_ABHQ01000015
130.5 KB
143 CDS

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whole genome shotgun sequence
NZ_ABHQ01000016
116.5 KB
103 CDS

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whole genome shotgun sequence
NZ_ABHQ01000017
110.8 KB
87 CDS

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whole genome shotgun sequence
NZ_ABHQ01000018
97.0 KB
80 CDS

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whole genome shotgun sequence
NZ_ABHQ01000019
87.5 KB
76 CDS

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whole genome shotgun sequence
NZ_ABHQ01000020
85.9 KB
79 CDS

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whole genome shotgun sequence
NZ_ABHQ01000021
82.7 KB
88 CDS

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whole genome shotgun sequence
NZ_ABHQ01000022
81.4 KB
84 CDS

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whole genome shotgun sequence
NZ_ABHQ01000023
71.5 KB
80 CDS

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whole genome shotgun sequence
NZ_ABHQ01000024
64.3 KB
57 CDS

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whole genome shotgun sequence
NZ_ABHQ01000025
64.0 KB
76 CDS

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whole genome shotgun sequence
NZ_ABHQ01000026
56.8 KB
63 CDS

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whole genome shotgun sequence
NZ_ABHQ01000027
55.5 KB
66 CDS

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whole genome shotgun sequence
NZ_ABHQ01000028
54.8 KB
61 CDS

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whole genome shotgun sequence
NZ_ABHQ01000029
44.0 KB
33 CDS

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whole genome shotgun sequence
NZ_ABHQ01000030
40.9 KB
42 CDS

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whole genome shotgun sequence
NZ_ABHQ01000031
39.2 KB
31 CDS

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whole genome shotgun sequence
NZ_ABHQ01000032
36.0 KB
33 CDS

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whole genome shotgun sequence
NZ_ABHQ01000033
32.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ABHQ01000034
30.3 KB
36 CDS

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whole genome shotgun sequence
NZ_ABHQ01000035
29.9 KB
24 CDS

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whole genome shotgun sequence
NZ_ABHQ01000036
26.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ABHQ01000037
22.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHQ01000038
20.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHQ01000039
19.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHQ01000040
19.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ABHQ01000041
18.0 KB
27 CDS

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whole genome shotgun sequence
NZ_ABHQ01000042
16.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ABHQ01000043
15.9 KB
12 CDS

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whole genome shotgun sequence
NZ_ABHQ01000044
14.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHQ01000045
9.7 KB
8 CDS

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whole genome shotgun sequence
NZ_ABHQ01000046
9.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ABHQ01000047
8.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHQ01000048
8.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ABHQ01000049
7.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ABHQ01000050
6.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000051
6.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ABHQ01000052
6.2 KB
12 CDS

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whole genome shotgun sequence
NZ_ABHQ01000053
5.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHQ01000054
5.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHQ01000055
5.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHQ01000056
5.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000057
4.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHQ01000058
4.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHQ01000059
3.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000060
3.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000061
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000062
2.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000063
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000064
2.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHQ01000065
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000066
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000067
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000068
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000069
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000070
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000071
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000072
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000073
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000074
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000075
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHQ01000076
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000077
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000078
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000079
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000080
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000081
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000082
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000083
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000084
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000085
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000086
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000087
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000088
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000089
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000090
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000091
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000092
1.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHQ01000093
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000094
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000095
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000096
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000097
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHQ01000098
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000099
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000100
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000101
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000102
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000103
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000104
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000105
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000106
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000107
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000108
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000109
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000110
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000111
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000112
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000113
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000114
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000115
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000116
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000117
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000118
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000119
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000120
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000121
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000122
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000123
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000124
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000125
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000126
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000127
990 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000128
982 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000129
981 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000130
957 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000131
952 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000132
931 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABHQ01000133
910 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000134
871 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHQ01000135
828 bytes
1 CDS

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Taxonomy

External Links

Escherichia coli O157:H7 str. EC4076

Search Genome

Sequences

PubMed Search for Escherichia coli O157:H7 str. EC4076

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