Escherichia coli O157:H7 str. EC4196

J. Craig Venter Institute

GC Content: 50.6%, Released Date: Nov. 8, 2007 #18074

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABHO01000001
509.6 KB
476 CDS

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whole genome shotgun sequence
NZ_ABHO01000002
347.7 KB
343 CDS

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whole genome shotgun sequence
NZ_ABHO01000003
268.3 KB
263 CDS

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whole genome shotgun sequence
NZ_ABHO01000004
208.8 KB
191 CDS

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whole genome shotgun sequence
NZ_ABHO01000005
208.5 KB
215 CDS

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whole genome shotgun sequence
NZ_ABHO01000006
203.2 KB
168 CDS

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whole genome shotgun sequence
NZ_ABHO01000007
199.8 KB
183 CDS

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whole genome shotgun sequence
NZ_ABHO01000008
195.1 KB
184 CDS

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whole genome shotgun sequence
NZ_ABHO01000009
173.1 KB
137 CDS

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whole genome shotgun sequence
NZ_ABHO01000010
148.6 KB
153 CDS

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whole genome shotgun sequence
NZ_ABHO01000011
148.3 KB
153 CDS

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whole genome shotgun sequence
NZ_ABHO01000012
141.3 KB
135 CDS

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whole genome shotgun sequence
NZ_ABHO01000013
129.2 KB
111 CDS

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whole genome shotgun sequence
NZ_ABHO01000014
115.0 KB
99 CDS

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whole genome shotgun sequence
NZ_ABHO01000015
113.6 KB
107 CDS

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whole genome shotgun sequence
NZ_ABHO01000016
103.9 KB
95 CDS

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whole genome shotgun sequence
NZ_ABHO01000017
98.6 KB
88 CDS

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whole genome shotgun sequence
NZ_ABHO01000018
88.2 KB
84 CDS

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whole genome shotgun sequence
NZ_ABHO01000019
88.0 KB
88 CDS

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whole genome shotgun sequence
NZ_ABHO01000020
81.6 KB
94 CDS

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whole genome shotgun sequence
NZ_ABHO01000021
80.6 KB
69 CDS

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whole genome shotgun sequence
NZ_ABHO01000022
79.6 KB
58 CDS

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whole genome shotgun sequence
NZ_ABHO01000023
77.8 KB
76 CDS

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whole genome shotgun sequence
NZ_ABHO01000024
71.9 KB
67 CDS

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whole genome shotgun sequence
NZ_ABHO01000025
68.4 KB
71 CDS

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whole genome shotgun sequence
NZ_ABHO01000026
67.0 KB
80 CDS

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whole genome shotgun sequence
NZ_ABHO01000027
65.6 KB
62 CDS

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whole genome shotgun sequence
NZ_ABHO01000028
61.0 KB
65 CDS

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whole genome shotgun sequence
NZ_ABHO01000029
48.1 KB
57 CDS

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whole genome shotgun sequence
NZ_ABHO01000030
46.7 KB
43 CDS

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whole genome shotgun sequence
NZ_ABHO01000031
45.0 KB
39 CDS

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whole genome shotgun sequence
NZ_ABHO01000032
44.5 KB
37 CDS

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whole genome shotgun sequence
NZ_ABHO01000033
38.7 KB
35 CDS

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whole genome shotgun sequence
NZ_ABHO01000034
38.2 KB
31 CDS

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whole genome shotgun sequence
NZ_ABHO01000035
38.2 KB
26 CDS

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whole genome shotgun sequence
NZ_ABHO01000036
37.5 KB
33 CDS

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whole genome shotgun sequence
NZ_ABHO01000037
36.6 KB
41 CDS

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whole genome shotgun sequence
NZ_ABHO01000038
36.3 KB
35 CDS

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whole genome shotgun sequence
NZ_ABHO01000039
35.9 KB
24 CDS

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whole genome shotgun sequence
NZ_ABHO01000040
35.5 KB
32 CDS

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whole genome shotgun sequence
NZ_ABHO01000041
33.5 KB
31 CDS

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whole genome shotgun sequence
NZ_ABHO01000042
32.9 KB
38 CDS

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whole genome shotgun sequence
NZ_ABHO01000043
31.5 KB
39 CDS

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whole genome shotgun sequence
NZ_ABHO01000044
30.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABHO01000045
30.8 KB
35 CDS

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whole genome shotgun sequence
NZ_ABHO01000046
30.6 KB
40 CDS

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whole genome shotgun sequence
NZ_ABHO01000047
29.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHO01000048
27.2 KB
23 CDS

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whole genome shotgun sequence
NZ_ABHO01000049
26.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ABHO01000050
26.4 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHO01000051
24.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ABHO01000052
23.9 KB
17 CDS

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whole genome shotgun sequence
NZ_ABHO01000053
22.5 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHO01000054
22.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ABHO01000055
21.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ABHO01000056
18.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABHO01000057
17.8 KB
19 CDS

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whole genome shotgun sequence
NZ_ABHO01000058
17.8 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHO01000059
17.8 KB
19 CDS

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whole genome shotgun sequence
NZ_ABHO01000060
17.4 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHO01000061
17.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ABHO01000062
15.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHO01000063
14.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHO01000064
13.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHO01000065
13.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHO01000066
12.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ABHO01000067
12.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ABHO01000068
12.0 KB
12 CDS

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whole genome shotgun sequence
NZ_ABHO01000069
10.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000070
9.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHO01000071
9.1 KB
9 CDS

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whole genome shotgun sequence
NZ_ABHO01000072
8.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ABHO01000073
7.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHO01000074
6.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000075
6.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHO01000076
5.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHO01000077
5.8 KB
8 CDS

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whole genome shotgun sequence
NZ_ABHO01000078
4.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHO01000079
4.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABHO01000080
3.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000081
3.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000082
3.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000083
3.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000084
3.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000085
3.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000086
2.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHO01000087
2.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000088
2.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000089
2.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000090
2.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000091
2.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000092
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000093
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000094
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHO01000095
2.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHO01000096
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000097
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHO01000098
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000099
2.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHO01000100
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000101
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHO01000102
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000103
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000104
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000105
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000106
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000107
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000108
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000109
1.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHO01000110
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000111
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000112
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000113
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000114
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000115
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000116
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000117
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000118
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000119
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000120
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000121
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000122
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000123
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000124
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000125
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000126
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000127
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000128
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000129
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000130
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000131
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000132
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000133
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000134
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000135
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000136
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000137
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000138
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000139
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000140
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000141
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000142
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000143
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000144
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000145
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000146
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000147
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHO01000148
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000149
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000150
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000151
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000152
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000153
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000154
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000155
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000156
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000157
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000158
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000159
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000160
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000161
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000162
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000163
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000164
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000165
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000166
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000167
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000168
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000169
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000170
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000171
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000172
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000173
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000174
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHO01000175
1016 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000176
995 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000177
994 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000178
990 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000179
987 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000180
985 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000181
972 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000182
953 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000183
928 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000184
923 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000185
823 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHO01000186
236 bytes
0 CDS

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Taxonomy

External Links

Escherichia coli O157:H7 str. EC4196

Search Genome

Sequences

PubMed Search for Escherichia coli O157:H7 str. EC4196

Related Genomes