Escherichia coli O157:H7 str. EC869

J. Craig Venter Institute

GC Content: 50.5%, Released Date: Nov. 8, 2007 #18080

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABHU01000001
502.8 KB
459 CDS

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whole genome shotgun sequence
NZ_ABHU01000002
488.3 KB
479 CDS

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whole genome shotgun sequence
NZ_ABHU01000003
474.8 KB
456 CDS

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whole genome shotgun sequence
NZ_ABHU01000004
345.1 KB
310 CDS

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whole genome shotgun sequence
NZ_ABHU01000005
309.7 KB
265 CDS

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whole genome shotgun sequence
NZ_ABHU01000006
248.1 KB
226 CDS

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whole genome shotgun sequence
NZ_ABHU01000007
216.8 KB
196 CDS

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whole genome shotgun sequence
NZ_ABHU01000008
200.1 KB
191 CDS

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whole genome shotgun sequence
NZ_ABHU01000009
177.2 KB
194 CDS

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whole genome shotgun sequence
NZ_ABHU01000010
165.3 KB
151 CDS

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whole genome shotgun sequence
NZ_ABHU01000011
162.0 KB
154 CDS

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whole genome shotgun sequence
NZ_ABHU01000012
161.3 KB
177 CDS

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whole genome shotgun sequence
NZ_ABHU01000013
126.4 KB
106 CDS

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whole genome shotgun sequence
NZ_ABHU01000014
119.4 KB
90 CDS

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whole genome shotgun sequence
NZ_ABHU01000015
115.8 KB
101 CDS

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whole genome shotgun sequence
NZ_ABHU01000016
105.3 KB
96 CDS

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whole genome shotgun sequence
NZ_ABHU01000017
104.6 KB
101 CDS

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whole genome shotgun sequence
NZ_ABHU01000018
95.4 KB
97 CDS

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whole genome shotgun sequence
NZ_ABHU01000019
92.0 KB
99 CDS

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whole genome shotgun sequence
NZ_ABHU01000020
88.8 KB
79 CDS

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whole genome shotgun sequence
NZ_ABHU01000021
85.8 KB
82 CDS

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whole genome shotgun sequence
NZ_ABHU01000022
77.4 KB
75 CDS

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whole genome shotgun sequence
NZ_ABHU01000023
76.4 KB
72 CDS

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whole genome shotgun sequence
NZ_ABHU01000024
73.4 KB
75 CDS

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whole genome shotgun sequence
NZ_ABHU01000025
73.1 KB
61 CDS

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whole genome shotgun sequence
NZ_ABHU01000026
68.6 KB
62 CDS

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whole genome shotgun sequence
NZ_ABHU01000027
63.6 KB
76 CDS

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whole genome shotgun sequence
NZ_ABHU01000028
61.1 KB
69 CDS

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whole genome shotgun sequence
NZ_ABHU01000029
54.0 KB
54 CDS

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whole genome shotgun sequence
NZ_ABHU01000030
53.2 KB
66 CDS

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whole genome shotgun sequence
NZ_ABHU01000031
44.6 KB
52 CDS

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whole genome shotgun sequence
NZ_ABHU01000032
41.6 KB
50 CDS

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whole genome shotgun sequence
NZ_ABHU01000033
40.1 KB
36 CDS

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whole genome shotgun sequence
NZ_ABHU01000034
39.5 KB
44 CDS

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whole genome shotgun sequence
NZ_ABHU01000035
37.3 KB
45 CDS

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whole genome shotgun sequence
NZ_ABHU01000036
33.6 KB
42 CDS

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whole genome shotgun sequence
NZ_ABHU01000037
32.0 KB
28 CDS

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whole genome shotgun sequence
NZ_ABHU01000038
24.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ABHU01000039
23.0 KB
28 CDS

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whole genome shotgun sequence
NZ_ABHU01000040
21.8 KB
27 CDS

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whole genome shotgun sequence
NZ_ABHU01000041
16.2 KB
17 CDS

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whole genome shotgun sequence
NZ_ABHU01000042
14.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHU01000043
14.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ABHU01000044
12.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ABHU01000045
11.8 KB
15 CDS

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whole genome shotgun sequence
NZ_ABHU01000046
9.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000047
7.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHU01000048
7.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ABHU01000049
7.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHU01000050
6.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000051
6.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHU01000052
6.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000053
3.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000054
3.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000055
3.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000056
3.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000057
3.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000058
3.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHU01000059
3.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000060
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000061
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHU01000062
2.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000063
2.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000064
2.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000065
2.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000066
2.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000067
2.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000068
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000069
2.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000070
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000071
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000072
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000073
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000074
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000075
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000076
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000077
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000078
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000079
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000080
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000081
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000082
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000083
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000084
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000085
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000086
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000087
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000088
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHU01000089
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000090
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000091
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000092
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000093
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000094
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000095
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000096
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000097
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000098
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000099
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000100
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000101
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000102
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000103
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHU01000104
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000105
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000106
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000107
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000108
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000109
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000110
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000111
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000112
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000113
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000114
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000115
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000116
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000117
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000118
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000119
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000120
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000121
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000122
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000123
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000124
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000125
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000126
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000127
1005 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000128
1005 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000129
1002 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000130
999 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000131
992 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000132
987 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000133
985 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000134
979 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000135
969 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000136
968 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000137
952 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000138
939 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000139
883 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000140
882 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000141
859 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000142
847 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000143
836 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000144
816 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000145
804 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000146
695 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABHU01000147
594 bytes
0 CDS

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Taxonomy

External Links

Escherichia coli O157:H7 str. EC869

Search Genome

Sequences

PubMed Search for Escherichia coli O157:H7 str. EC869

Related Genomes