Eubacterium siraeum DSM 15702

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 45.0%, Released Date: July 13, 2007 #18089

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCA03000001
282 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABCA03000002
243 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABCA03000003
703 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABCA03000004
292 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABCA03000005
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCA03000006
2.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCA03000007
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCA03000008
771 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABCA03000009
672 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABCA03000010
4.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCA03000011
4.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCA03000012
5.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCA03000013
3.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCA03000014
6.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCA03000015
8.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ABCA03000016
11.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ABCA03000017
10.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ABCA03000018
13.8 KB
15 CDS

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whole genome shotgun sequence
NZ_ABCA03000019
7.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCA03000020
7.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCA03000021
10.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ABCA03000022
26.2 KB
28 CDS

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whole genome shotgun sequence
NZ_ABCA03000023
24.6 KB
29 CDS

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whole genome shotgun sequence
NZ_ABCA03000024
12.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ABCA03000025
8.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCA03000026
16.3 KB
15 CDS

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whole genome shotgun sequence
NZ_ABCA03000027
16.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ABCA03000028
30.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABCA03000029
24.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABCA03000030
22.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCA03000031
29.8 KB
35 CDS

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whole genome shotgun sequence
NZ_ABCA03000032
56.4 KB
74 CDS

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whole genome shotgun sequence
NZ_ABCA03000033
53.2 KB
70 CDS

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whole genome shotgun sequence
NZ_ABCA03000034
51.8 KB
34 CDS

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whole genome shotgun sequence
NZ_ABCA03000035
37.1 KB
36 CDS

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whole genome shotgun sequence
NZ_ABCA03000036
66.4 KB
65 CDS

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whole genome shotgun sequence
NZ_ABCA03000037
64.3 KB
65 CDS

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whole genome shotgun sequence
NZ_ABCA03000038
85.3 KB
75 CDS

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whole genome shotgun sequence
NZ_ABCA03000039
100.6 KB
96 CDS

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whole genome shotgun sequence
NZ_ABCA03000040
50.5 KB
49 CDS

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whole genome shotgun sequence
NZ_ABCA03000041
90.3 KB
97 CDS

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whole genome shotgun sequence
NZ_ABCA03000042
44.7 KB
51 CDS

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whole genome shotgun sequence
NZ_ABCA03000043
85.0 KB
79 CDS

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whole genome shotgun sequence
NZ_ABCA03000044
94.0 KB
102 CDS

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whole genome shotgun sequence
NZ_ABCA03000045
103.5 KB
100 CDS

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whole genome shotgun sequence
NZ_ABCA03000046
101.6 KB
109 CDS

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whole genome shotgun sequence
NZ_ABCA03000047
108.2 KB
116 CDS

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whole genome shotgun sequence
NZ_ABCA03000048
114.8 KB
131 CDS

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whole genome shotgun sequence
NZ_ABCA03000049
114.2 KB
113 CDS

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whole genome shotgun sequence
NZ_ABCA03000050
125.2 KB
143 CDS

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whole genome shotgun sequence
NZ_ABCA03000051
125.5 KB
118 CDS

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whole genome shotgun sequence
NZ_ABCA03000052
88.1 KB
85 CDS

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whole genome shotgun sequence
NZ_ABCA03000053
132.4 KB
123 CDS

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whole genome shotgun sequence
NZ_ABCA03000054
144.6 KB
138 CDS

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whole genome shotgun sequence
NZ_ABCA03000055
279.7 KB
300 CDS

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Taxonomy

External Links

Eubacterium siraeum DSM 15702

Search Genome

Sequences

PubMed Search for Eubacterium siraeum DSM 15702

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