Francisella tularensis subsp. holarctica 257

Broad Institute

Genome Size: 1.9 megabases, GC Content: 32.1%, Released Date: Dec. 18, 2006 #14860

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000001
35.9 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000002
112.9 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000003
100.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000004
10.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000005
49.9 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000006
20.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000007
26.6 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000008
31.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000009
34.3 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000010
6.2 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000011
69.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000012
33.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000013
12.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000014
68.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000015
264.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000016
3.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000017
3.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000018
3.3 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000019
3.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000020
6.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000021
7.8 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000022
6.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000023
3.2 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000024
239.4 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000025
138.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000026
101.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000027
237.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000028
66.4 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000029
56.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000030
75.7 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_AAUD01000031
16.8 KB
0 CDS

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Taxonomy

External Links

Francisella tularensis subsp. holarctica 257

Search Genome

Sequences

PubMed Search for Francisella tularensis subsp. holarctica 257

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