Francisella tularensis subsp. tularensis MA00-2987

Broad Institute

Genome Size: 1.9 megabases, GC Content: 32.1%, Released Date: Aug. 26, 2008 #18106

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

sequence, whole genome shotgun sequence
NZ_ABRI01000001
38.8 KB
37 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000002
99.0 KB
87 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000003
1.3 KB
3 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000004
44.8 KB
43 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000005
129.0 KB
137 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000006
7.2 KB
13 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000007
25.6 KB
26 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000008
257.9 KB
225 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000009
112.8 KB
108 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000010
593 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000011
133.9 KB
144 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000012
260.6 KB
259 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000013
2.0 KB
5 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000014
1.7 KB
4 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000015
113.1 KB
103 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000016
22.2 KB
28 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000017
1.3 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000018
59.8 KB
53 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000019
2.3 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000020
19.2 KB
15 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000021
6.0 KB
2 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000022
41.8 KB
33 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000023
116.3 KB
116 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000024
841 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000025
2.3 KB
4 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000026
88.1 KB
80 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000027
2.8 KB
4 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000028
48.9 KB
50 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000029
2.9 KB
5 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000030
23.7 KB
25 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000031
58.9 KB
56 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000032
87.7 KB
86 CDS

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sequence, whole genome shotgun sequence
NZ_ABRI01000033
11.4 KB
12 CDS

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Taxonomy

External Links

Francisella tularensis subsp. tularensis MA00-2987

Search Genome

Sequences

PubMed Search for Francisella tularensis subsp. tularensis MA00-2987

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