Fusobacterium nucleatum subsp. polymorphum ATCC 10953

Baylor College of Medicine

Genome Size: 2.41 megabases, GC Content: 26.8%, Released Date: July 12, 2006 #14869

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000001
12.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000002
13.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000003
14.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000004
28.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000005
29.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000006
43.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000007
96.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000008
95.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000009
134.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000010
163.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000011
242.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000012
276.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000013
378.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AARG01000014
842.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Fusobacterium nucleatum subsp. polymorphum ATCC 10953

Search Genome

Sequences

PubMed Search for Fusobacterium nucleatum subsp. polymorphum ATCC 10953

Related Genomes