gamma proteobacterium NOR5-3

J. Craig Venter Institute

Genome Size: 4.2 megabases, GC Content: 56.3%, Released Date: Dec. 22, 2008 #15420

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000001
8.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000002
204.7 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000003
248.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000004
5.8 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000005
365.7 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000006
199.4 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000007
167.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000008
87.4 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000009
39.6 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000010
57.3 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000011
73.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000012
316.9 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000013
244.8 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000014
324.8 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000015
191.1 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000016
52.3 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000017
662.7 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000018
3.3 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000019
13.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000020
179.0 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000021
31.6 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000022
97.9 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000023
63.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000024
65.9 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000025
62.5 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000026
30.8 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000027
169.7 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000028
137.3 KB
0 CDS

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unfinished sequence, whole genome shotgun sequence
NZ_ACCX01000029
1.5 KB
0 CDS

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Taxonomy

External Links

gamma proteobacterium NOR5-3

Search Genome

Sequences

PubMed Search for gamma proteobacterium NOR5-3

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