Gemella moribillum M424

Broad Institute

#20386

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

cont1.1, whole genome shotgun sequence
ACRX01000001
3.3 KB
3 CDS

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cont1.2, whole genome shotgun sequence
ACRX01000002
51.6 KB
47 CDS

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cont1.3, whole genome shotgun sequence
ACRX01000003
21.7 KB
16 CDS

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cont1.4, whole genome shotgun sequence
ACRX01000004
278.9 KB
267 CDS

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cont1.5, whole genome shotgun sequence
ACRX01000005
92.8 KB
94 CDS

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cont1.6, whole genome shotgun sequence
ACRX01000006
156.0 KB
149 CDS

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cont1.7, whole genome shotgun sequence
ACRX01000007
56.5 KB
44 CDS

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cont1.8, whole genome shotgun sequence
ACRX01000008
22.7 KB
18 CDS

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cont1.9, whole genome shotgun sequence
ACRX01000009
98.6 KB
82 CDS

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cont1.10, whole genome shotgun sequence
ACRX01000010
2.4 KB
2 CDS

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cont1.11, whole genome shotgun sequence
ACRX01000011
180.4 KB
186 CDS

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cont1.12, whole genome shotgun sequence
ACRX01000012
88.0 KB
85 CDS

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cont1.13, whole genome shotgun sequence
ACRX01000013
13.5 KB
11 CDS

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cont1.14, whole genome shotgun sequence
ACRX01000014
223.2 KB
218 CDS

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cont1.15, whole genome shotgun sequence
ACRX01000015
42.0 KB
45 CDS

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cont1.16, whole genome shotgun sequence
ACRX01000016
3.0 KB
5 CDS

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cont1.17, whole genome shotgun sequence
ACRX01000017
8.2 KB
5 CDS

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cont1.18, whole genome shotgun sequence
ACRX01000018
940 bytes
2 CDS

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cont1.19, whole genome shotgun sequence
ACRX01000019
11.3 KB
10 CDS

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cont1.20, whole genome shotgun sequence
ACRX01000020
84.1 KB
75 CDS

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cont1.21, whole genome shotgun sequence
ACRX01000021
3.3 KB
3 CDS

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cont1.22, whole genome shotgun sequence
ACRX01000022
38.7 KB
36 CDS

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cont1.23, whole genome shotgun sequence
ACRX01000023
2.3 KB
1 CDS

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cont1.24, whole genome shotgun sequence
ACRX01000024
44.6 KB
42 CDS

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cont1.25, whole genome shotgun sequence
ACRX01000025
90.6 KB
84 CDS

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cont1.26, whole genome shotgun sequence
ACRX01000026
12.8 KB
10 CDS

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cont1.27, whole genome shotgun sequence
ACRX01000027
25.5 KB
30 CDS

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cont1.28, whole genome shotgun sequence
ACRX01000028
17.8 KB
19 CDS

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cont1.29, whole genome shotgun sequence
ACRX01000029
8.5 KB
11 CDS

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cont1.30, whole genome shotgun sequence
ACRX01000030
8.2 KB
10 CDS

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cont1.31, whole genome shotgun sequence
ACRX01000031
7.0 KB
3 CDS

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cont1.32, whole genome shotgun sequence
ACRX01000032
1.9 KB
4 CDS

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cont1.33, whole genome shotgun sequence
ACRX01000033
848 bytes
1 CDS

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cont1.34, whole genome shotgun sequence
ACRX01000034
715 bytes
0 CDS

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cont1.35, whole genome shotgun sequence
ACRX01000035
714 bytes
1 CDS

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cont1.36, whole genome shotgun sequence
ACRX01000036
683 bytes
1 CDS

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cont1.37, whole genome shotgun sequence
ACRX01000037
673 bytes
1 CDS

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cont1.38, whole genome shotgun sequence
ACRX01000038
530 bytes
0 CDS

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cont1.39, whole genome shotgun sequence
ACRX01000039
518 bytes
1 CDS

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Taxonomy

External Links

Gemella moribillum M424

Search Genome

Sequences

PubMed Search for Gemella moribillum M424

Related Genomes