Haemophilus influenzae 22.1-21

Allegheny-Singer Research Institute (ASRI)

Genome Size: 1.85 megabases, GC Content: 38.0%, Released Date: April 11, 2007 #18126

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAZD01000001
633.0 KB
753 CDS

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whole genome shotgun sequence
NZ_AAZD01000002
429.8 KB
524 CDS

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whole genome shotgun sequence
NZ_AAZD01000003
363.1 KB
405 CDS

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whole genome shotgun sequence
NZ_AAZD01000004
170.6 KB
213 CDS

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whole genome shotgun sequence
NZ_AAZD01000005
90.7 KB
109 CDS

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whole genome shotgun sequence
NZ_AAZD01000006
43.9 KB
58 CDS

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whole genome shotgun sequence
NZ_AAZD01000007
33.4 KB
34 CDS

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whole genome shotgun sequence
NZ_AAZD01000008
32.2 KB
54 CDS

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whole genome shotgun sequence
NZ_AAZD01000009
21.8 KB
31 CDS

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whole genome shotgun sequence
NZ_AAZD01000010
10.1 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZD01000011
5.0 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZD01000012
3.3 KB
6 CDS

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whole genome shotgun sequence
NZ_AAZD01000013
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZD01000014
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZD01000015
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZD01000016
713 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAZD01000017
709 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAZD01000018
556 bytes
2 CDS

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Taxonomy

External Links

Haemophilus influenzae 22.1-21

Search Genome

Sequences

PubMed Search for Haemophilus influenzae 22.1-21

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