Haemophilus influenzae 3655

Allegheny-Singer Research Institute (ASRI)

Genome Size: 1.85 megabases, GC Content: 38.0%, Released Date: April 11, 2007 #18128

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAZF01000001
372.7 KB
389 CDS

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whole genome shotgun sequence
NZ_AAZF01000002
281.3 KB
300 CDS

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whole genome shotgun sequence
NZ_AAZF01000003
203.0 KB
224 CDS

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whole genome shotgun sequence
NZ_AAZF01000004
180.2 KB
192 CDS

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whole genome shotgun sequence
NZ_AAZF01000005
174.5 KB
176 CDS

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whole genome shotgun sequence
NZ_AAZF01000006
95.3 KB
94 CDS

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whole genome shotgun sequence
NZ_AAZF01000007
94.7 KB
93 CDS

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whole genome shotgun sequence
NZ_AAZF01000008
66.9 KB
63 CDS

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whole genome shotgun sequence
NZ_AAZF01000009
60.8 KB
63 CDS

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whole genome shotgun sequence
NZ_AAZF01000010
55.6 KB
48 CDS

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whole genome shotgun sequence
NZ_AAZF01000011
46.7 KB
46 CDS

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whole genome shotgun sequence
NZ_AAZF01000012
42.6 KB
38 CDS

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whole genome shotgun sequence
NZ_AAZF01000013
28.4 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZF01000014
28.0 KB
32 CDS

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whole genome shotgun sequence
NZ_AAZF01000015
27.4 KB
33 CDS

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whole genome shotgun sequence
NZ_AAZF01000016
26.7 KB
43 CDS

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whole genome shotgun sequence
NZ_AAZF01000017
25.8 KB
41 CDS

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whole genome shotgun sequence
NZ_AAZF01000018
9.5 KB
10 CDS

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whole genome shotgun sequence
NZ_AAZF01000019
8.6 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZF01000020
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZF01000021
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZF01000022
968 bytes
3 CDS

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whole genome shotgun sequence
NZ_AAZF01000023
896 bytes
0 CDS

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Taxonomy

External Links

Haemophilus influenzae 3655

Search Genome

Sequences

PubMed Search for Haemophilus influenzae 3655

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