Haemophilus influenzae NT127

Broad Institute

Genome Size: 1.9 megabases, GC Content: 38.0%, Released Date: Sept. 29, 2009 #20392

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACSL01000001
205.3 KB
222 CDS

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whole genome shotgun sequence
NZ_ACSL01000002
189.2 KB
176 CDS

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whole genome shotgun sequence
NZ_ACSL01000003
143.1 KB
125 CDS

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whole genome shotgun sequence
NZ_ACSL01000004
130.5 KB
131 CDS

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whole genome shotgun sequence
NZ_ACSL01000005
127.7 KB
131 CDS

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whole genome shotgun sequence
NZ_ACSL01000006
86.7 KB
84 CDS

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whole genome shotgun sequence
NZ_ACSL01000007
75.3 KB
85 CDS

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whole genome shotgun sequence
NZ_ACSL01000008
71.9 KB
82 CDS

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whole genome shotgun sequence
NZ_ACSL01000009
64.7 KB
55 CDS

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whole genome shotgun sequence
NZ_ACSL01000010
64.1 KB
49 CDS

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whole genome shotgun sequence
NZ_ACSL01000011
61.8 KB
65 CDS

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whole genome shotgun sequence
NZ_ACSL01000012
61.7 KB
57 CDS

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whole genome shotgun sequence
NZ_ACSL01000013
59.7 KB
54 CDS

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whole genome shotgun sequence
NZ_ACSL01000014
58.8 KB
57 CDS

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whole genome shotgun sequence
NZ_ACSL01000015
58.5 KB
57 CDS

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whole genome shotgun sequence
NZ_ACSL01000016
56.8 KB
74 CDS

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whole genome shotgun sequence
NZ_ACSL01000017
41.4 KB
63 CDS

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whole genome shotgun sequence
NZ_ACSL01000018
39.1 KB
29 CDS

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whole genome shotgun sequence
NZ_ACSL01000019
28.9 KB
30 CDS

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whole genome shotgun sequence
NZ_ACSL01000020
27.4 KB
23 CDS

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whole genome shotgun sequence
NZ_ACSL01000021
27.4 KB
24 CDS

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whole genome shotgun sequence
NZ_ACSL01000022
24.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ACSL01000023
24.1 KB
25 CDS

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whole genome shotgun sequence
NZ_ACSL01000024
24.0 KB
20 CDS

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whole genome shotgun sequence
NZ_ACSL01000025
19.1 KB
20 CDS

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whole genome shotgun sequence
NZ_ACSL01000026
18.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ACSL01000027
9.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ACSL01000028
5.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACSL01000029
2.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACSL01000030
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACSL01000031
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACSL01000032
2.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ACSL01000033
1.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACSL01000034
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACSL01000035
961 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACSL01000036
909 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACSL01000037
874 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACSL01000038
567 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACSL01000039
562 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACSL01000040
553 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACSL01000041
510 bytes
2 CDS

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Taxonomy

External Links

Haemophilus influenzae NT127

Search Genome

Sequences

PubMed Search for Haemophilus influenzae NT127

Related Genomes