Haemophilus influenzae PittHH

Allegheny-Singer Research Institute (ASRI)

Genome Size: 1.83 megabases, GC Content: 38.0%, Released Date: April 13, 2007 #18132

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAZH01000001
160.2 KB
187 CDS

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whole genome shotgun sequence
NZ_AAZH01000002
151.1 KB
168 CDS

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whole genome shotgun sequence
NZ_AAZH01000003
144.5 KB
170 CDS

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whole genome shotgun sequence
NZ_AAZH01000004
102.4 KB
127 CDS

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whole genome shotgun sequence
NZ_AAZH01000005
102.2 KB
99 CDS

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whole genome shotgun sequence
NZ_AAZH01000006
96.7 KB
116 CDS

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whole genome shotgun sequence
NZ_AAZH01000007
93.7 KB
105 CDS

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whole genome shotgun sequence
NZ_AAZH01000008
93.2 KB
97 CDS

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whole genome shotgun sequence
NZ_AAZH01000009
85.4 KB
110 CDS

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whole genome shotgun sequence
NZ_AAZH01000010
80.8 KB
81 CDS

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whole genome shotgun sequence
NZ_AAZH01000011
68.8 KB
77 CDS

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whole genome shotgun sequence
NZ_AAZH01000012
65.7 KB
67 CDS

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whole genome shotgun sequence
NZ_AAZH01000013
59.8 KB
71 CDS

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whole genome shotgun sequence
NZ_AAZH01000014
43.0 KB
47 CDS

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whole genome shotgun sequence
NZ_AAZH01000015
41.2 KB
40 CDS

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whole genome shotgun sequence
NZ_AAZH01000016
30.4 KB
32 CDS

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whole genome shotgun sequence
NZ_AAZH01000017
30.0 KB
29 CDS

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whole genome shotgun sequence
NZ_AAZH01000018
29.1 KB
27 CDS

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whole genome shotgun sequence
NZ_AAZH01000019
27.0 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZH01000020
26.7 KB
25 CDS

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whole genome shotgun sequence
NZ_AAZH01000021
24.4 KB
26 CDS

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whole genome shotgun sequence
NZ_AAZH01000022
23.4 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZH01000023
23.3 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZH01000024
17.5 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZH01000025
17.0 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZH01000026
15.2 KB
18 CDS

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whole genome shotgun sequence
NZ_AAZH01000027
15.0 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZH01000028
13.5 KB
13 CDS

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whole genome shotgun sequence
NZ_AAZH01000029
12.3 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZH01000030
11.5 KB
9 CDS

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whole genome shotgun sequence
NZ_AAZH01000031
9.4 KB
12 CDS

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whole genome shotgun sequence
NZ_AAZH01000032
9.3 KB
11 CDS

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whole genome shotgun sequence
NZ_AAZH01000033
8.1 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZH01000034
7.3 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZH01000035
6.6 KB
7 CDS

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whole genome shotgun sequence
NZ_AAZH01000036
6.2 KB
7 CDS

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whole genome shotgun sequence
NZ_AAZH01000037
5.4 KB
11 CDS

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whole genome shotgun sequence
NZ_AAZH01000038
4.8 KB
5 CDS

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whole genome shotgun sequence
NZ_AAZH01000039
3.3 KB
0 CDS

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whole genome shotgun sequence
NZ_AAZH01000040
3.3 KB
6 CDS

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whole genome shotgun sequence
NZ_AAZH01000041
3.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZH01000042
2.7 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000043
2.4 KB
5 CDS

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whole genome shotgun sequence
NZ_AAZH01000044
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZH01000045
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZH01000046
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZH01000047
1.6 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZH01000048
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000049
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AAZH01000050
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000051
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000052
923 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000053
895 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000054
826 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000055
747 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000056
704 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000057
680 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000058
644 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZH01000059
638 bytes
1 CDS

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Taxonomy

External Links

Haemophilus influenzae PittHH

Search Genome

Sequences

PubMed Search for Haemophilus influenzae PittHH

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