Idiomarina baltica OS145

J. Craig Venter Institute

Genome Size: 5.0 megabases, GC Content: 47.3%, Released Date: Jan. 24, 2006 #18149

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAMX01000001
274.8 KB
269 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000002
233.0 KB
220 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000003
202.3 KB
190 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000004
163.8 KB
157 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000005
144.6 KB
133 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000006
113.8 KB
110 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000007
111.5 KB
106 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000008
97.8 KB
103 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000009
88.2 KB
91 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000010
87.5 KB
89 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000011
84.1 KB
90 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000012
79.1 KB
92 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000013
73.6 KB
71 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000014
72.9 KB
71 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000015
69.7 KB
70 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000016
69.6 KB
69 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000017
55.1 KB
47 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000018
51.5 KB
43 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000019
46.4 KB
44 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000020
43.7 KB
41 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000021
43.2 KB
41 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000022
40.2 KB
31 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000023
33.2 KB
35 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000024
32.3 KB
32 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000025
28.6 KB
32 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000026
28.5 KB
30 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000027
21.5 KB
21 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000028
19.3 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000029
17.9 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000030
16.7 KB
29 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000031
16.4 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000032
12.2 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000033
11.5 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000034
11.1 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000035
11.0 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000036
10.5 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000037
10.4 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000038
10.3 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000039
10.3 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000040
9.8 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000041
8.9 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000042
8.8 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000043
8.7 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000044
8.4 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000045
7.8 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000046
7.6 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000047
4.3 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000048
4.1 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000049
3.7 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000050
3.1 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000051
2.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000052
2.8 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000053
2.7 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000054
2.7 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000055
2.4 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000056
2.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000057
2.0 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000058
1.7 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000059
1.7 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000060
1.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000061
1.6 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000062
1.5 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000063
1.4 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000064
1.3 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000065
1.2 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000066
1.2 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000067
1.1 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000068
1.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000069
1.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AAMX01000070
942 bytes
1 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Idiomarina baltica OS145

Search Genome

Sequences

PubMed Search for Idiomarina baltica OS145

Related Genomes