Lactobacillus amylolyticus DSM 11664

Baylor College of Medicine

Genome Size: 1.5 megabases, GC Content: 38.2%, Released Date: April 23, 2010 #20404

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00001, whole genome shotgun sequence
NZ_ADNY01000001
54.0 KB
56 CDS

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contig00002, whole genome shotgun sequence
NZ_ADNY01000002
1.0 KB
2 CDS

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contig00003, whole genome shotgun sequence
NZ_ADNY01000003
2.0 KB
2 CDS

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contig00004, whole genome shotgun sequence
NZ_ADNY01000004
51.6 KB
57 CDS

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contig00005, whole genome shotgun sequence
NZ_ADNY01000005
7.8 KB
10 CDS

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contig00006, whole genome shotgun sequence
NZ_ADNY01000006
5.1 KB
0 CDS

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contig00007, whole genome shotgun sequence
NZ_ADNY01000007
31.9 KB
38 CDS

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contig00008, whole genome shotgun sequence
NZ_ADNY01000008
1.4 KB
3 CDS

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contig00009, whole genome shotgun sequence
NZ_ADNY01000009
2.9 KB
4 CDS

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contig00010, whole genome shotgun sequence
NZ_ADNY01000010
45.5 KB
63 CDS

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contig00011, whole genome shotgun sequence
NZ_ADNY01000011
69.0 KB
73 CDS

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contig00012, whole genome shotgun sequence
NZ_ADNY01000012
5.0 KB
8 CDS

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contig00013, whole genome shotgun sequence
NZ_ADNY01000013
182.7 KB
190 CDS

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contig00015, whole genome shotgun sequence
NZ_ADNY01000014
1.4 KB
1 CDS

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contig00017, whole genome shotgun sequence
NZ_ADNY01000015
2.0 KB
4 CDS

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contig00019, whole genome shotgun sequence
NZ_ADNY01000016
15.5 KB
18 CDS

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contig00020, whole genome shotgun sequence
NZ_ADNY01000017
4.4 KB
5 CDS

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contig00021, whole genome shotgun sequence
NZ_ADNY01000018
15.3 KB
18 CDS

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contig00023, whole genome shotgun sequence
NZ_ADNY01000019
1.6 KB
1 CDS

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contig00024, whole genome shotgun sequence
NZ_ADNY01000020
14.4 KB
27 CDS

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contig00025, whole genome shotgun sequence
NZ_ADNY01000021
1.3 KB
1 CDS

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contig00026, whole genome shotgun sequence
NZ_ADNY01000022
19.8 KB
22 CDS

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contig00027, whole genome shotgun sequence
NZ_ADNY01000023
29.6 KB
33 CDS

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contig00028, whole genome shotgun sequence
NZ_ADNY01000024
16.2 KB
13 CDS

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contig00029, whole genome shotgun sequence
NZ_ADNY01000025
19.3 KB
23 CDS

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contig00030, whole genome shotgun sequence
NZ_ADNY01000026
16.9 KB
20 CDS

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contig00031, whole genome shotgun sequence
NZ_ADNY01000027
13.5 KB
10 CDS

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contig00032, whole genome shotgun sequence
NZ_ADNY01000028
4.3 KB
6 CDS

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contig00033, whole genome shotgun sequence
NZ_ADNY01000029
113.6 KB
134 CDS

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contig00034, whole genome shotgun sequence
NZ_ADNY01000030
15.6 KB
14 CDS

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contig00035, whole genome shotgun sequence
NZ_ADNY01000031
33.9 KB
42 CDS

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contig00036, whole genome shotgun sequence
NZ_ADNY01000032
13.7 KB
13 CDS

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contig00040, whole genome shotgun sequence
NZ_ADNY01000033
530 bytes
1 CDS

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contig00048, whole genome shotgun sequence
NZ_ADNY01000034
929 bytes
1 CDS

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contig00050, whole genome shotgun sequence
NZ_ADNY01000035
39.7 KB
35 CDS

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contig00051, whole genome shotgun sequence
NZ_ADNY01000036
49.9 KB
53 CDS

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contig00064, whole genome shotgun sequence
NZ_ADNY01000037
6.0 KB
6 CDS

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contig00065, whole genome shotgun sequence
NZ_ADNY01000038
29.8 KB
36 CDS

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contig00066, whole genome shotgun sequence
NZ_ADNY01000039
31.7 KB
30 CDS

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contig00067, whole genome shotgun sequence
NZ_ADNY01000040
813 bytes
1 CDS

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contig00068, whole genome shotgun sequence
NZ_ADNY01000041
6.7 KB
11 CDS

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contig00069, whole genome shotgun sequence
NZ_ADNY01000042
43.5 KB
54 CDS

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contig00070, whole genome shotgun sequence
NZ_ADNY01000043
7.8 KB
13 CDS

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contig00071, whole genome shotgun sequence
NZ_ADNY01000044
1.6 KB
1 CDS

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contig00072, whole genome shotgun sequence
NZ_ADNY01000045
4.4 KB
10 CDS

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contig00073, whole genome shotgun sequence
NZ_ADNY01000046
31.2 KB
37 CDS

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contig00074, whole genome shotgun sequence
NZ_ADNY01000047
14.9 KB
21 CDS

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contig00076, whole genome shotgun sequence
NZ_ADNY01000048
3.5 KB
5 CDS

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contig00077, whole genome shotgun sequence
NZ_ADNY01000049
36.5 KB
38 CDS

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contig00078, whole genome shotgun sequence
NZ_ADNY01000050
660 bytes
1 CDS

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contig00079, whole genome shotgun sequence
NZ_ADNY01000051
16.3 KB
15 CDS

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contig00081, whole genome shotgun sequence
NZ_ADNY01000052
12.5 KB
18 CDS

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contig00082, whole genome shotgun sequence
NZ_ADNY01000053
528 bytes
1 CDS

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contig00083, whole genome shotgun sequence
NZ_ADNY01000054
10.3 KB
9 CDS

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contig00084, whole genome shotgun sequence
NZ_ADNY01000055
48.5 KB
53 CDS

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contig00086, whole genome shotgun sequence
NZ_ADNY01000056
49.4 KB
51 CDS

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contig00087, whole genome shotgun sequence
NZ_ADNY01000057
13.9 KB
13 CDS

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contig00088, whole genome shotgun sequence
NZ_ADNY01000058
12.4 KB
10 CDS

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contig00089, whole genome shotgun sequence
NZ_ADNY01000059
1.5 KB
2 CDS

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contig00090, whole genome shotgun sequence
NZ_ADNY01000060
782 bytes
1 CDS

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contig00091, whole genome shotgun sequence
NZ_ADNY01000061
14.9 KB
21 CDS

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contig00092, whole genome shotgun sequence
NZ_ADNY01000062
5.7 KB
7 CDS

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contig00093, whole genome shotgun sequence
NZ_ADNY01000063
8.7 KB
7 CDS

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contig00094, whole genome shotgun sequence
NZ_ADNY01000064
569 bytes
1 CDS

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contig00095, whole genome shotgun sequence
NZ_ADNY01000065
814 bytes
1 CDS

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contig00097, whole genome shotgun sequence
NZ_ADNY01000066
159.5 KB
174 CDS

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contig00098, whole genome shotgun sequence
NZ_ADNY01000067
11.4 KB
13 CDS

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contig00099, whole genome shotgun sequence
NZ_ADNY01000068
2.2 KB
2 CDS

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contig00100, whole genome shotgun sequence
NZ_ADNY01000069
6.1 KB
9 CDS

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contig00101, whole genome shotgun sequence
NZ_ADNY01000070
1.6 KB
4 CDS

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contig00103, whole genome shotgun sequence
NZ_ADNY01000071
2.7 KB
5 CDS

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contig00104, whole genome shotgun sequence
NZ_ADNY01000072
1.2 KB
1 CDS

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contig00106, whole genome shotgun sequence
NZ_ADNY01000073
886 bytes
1 CDS

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Taxonomy

External Links

Lactobacillus amylolyticus DSM 11664

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Sequences

PubMed Search for Lactobacillus amylolyticus DSM 11664

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