Lactobacillus farciminis KCTC 3681

Korea Research Institute of Bioscience and Biotechnology

#20416

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00003, whole genome shotgun sequence
AEOT01000001
88.8 KB
0 CDS

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contig00004, whole genome shotgun sequence
AEOT01000002
115.3 KB
0 CDS

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contig00005, whole genome shotgun sequence
AEOT01000003
148.2 KB
0 CDS

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contig00006, whole genome shotgun sequence
AEOT01000004
84.7 KB
0 CDS

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contig00007, whole genome shotgun sequence
AEOT01000005
102.6 KB
0 CDS

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contig00008, whole genome shotgun sequence
AEOT01000006
55.4 KB
0 CDS

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contig00009, whole genome shotgun sequence
AEOT01000007
12.3 KB
0 CDS

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contig00010, whole genome shotgun sequence
AEOT01000008
70.1 KB
0 CDS

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contig00013, whole genome shotgun sequence
AEOT01000009
37.9 KB
0 CDS

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contig00014, whole genome shotgun sequence
AEOT01000010
126.1 KB
0 CDS

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contig00015, whole genome shotgun sequence
AEOT01000011
54.3 KB
0 CDS

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contig00022, whole genome shotgun sequence
AEOT01000012
9.1 KB
0 CDS

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contig00023, whole genome shotgun sequence
AEOT01000013
27.4 KB
0 CDS

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contig00024, whole genome shotgun sequence
AEOT01000014
142.0 KB
0 CDS

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contig00025, whole genome shotgun sequence
AEOT01000015
86.6 KB
0 CDS

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contig00026, whole genome shotgun sequence
AEOT01000016
34.9 KB
0 CDS

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contig00027, whole genome shotgun sequence
AEOT01000017
116.6 KB
0 CDS

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contig00028, whole genome shotgun sequence
AEOT01000018
3.5 KB
0 CDS

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contig00029, whole genome shotgun sequence
AEOT01000019
11.0 KB
0 CDS

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contig00030, whole genome shotgun sequence
AEOT01000020
209.5 KB
0 CDS

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contig00031, whole genome shotgun sequence
AEOT01000021
47.8 KB
0 CDS

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contig00032, whole genome shotgun sequence
AEOT01000022
9.0 KB
0 CDS

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contig00033, whole genome shotgun sequence
AEOT01000023
139.8 KB
0 CDS

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contig00034, whole genome shotgun sequence
AEOT01000024
18.5 KB
0 CDS

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contig00035, whole genome shotgun sequence
AEOT01000025
5.8 KB
0 CDS

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contig00036, whole genome shotgun sequence
AEOT01000026
126.1 KB
0 CDS

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contig00043, whole genome shotgun sequence
AEOT01000027
403.4 KB
0 CDS

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contig00044, whole genome shotgun sequence
AEOT01000028
13.6 KB
0 CDS

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contig00045, whole genome shotgun sequence
AEOT01000029
2.9 KB
0 CDS

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contig00046, whole genome shotgun sequence
AEOT01000030
52.6 KB
0 CDS

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contig00047, whole genome shotgun sequence
AEOT01000031
3.7 KB
0 CDS

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contig00048, whole genome shotgun sequence
AEOT01000032
23.4 KB
0 CDS

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contig00049, whole genome shotgun sequence
AEOT01000033
25.0 KB
0 CDS

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contig00054, whole genome shotgun sequence
AEOT01000034
1.8 KB
0 CDS

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contig00055, whole genome shotgun sequence
AEOT01000035
3.0 KB
0 CDS

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Taxonomy

External Links

Lactobacillus farciminis KCTC 3681

Search Genome

Sequences

PubMed Search for Lactobacillus farciminis KCTC 3681

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