Lactobacillus jensenii 269-3

J. Craig Venter Institute

GC Content: 34.4%, Released Date: June 3, 2009 #18167

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACOY01000001
91.0 KB
86 CDS

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whole genome shotgun sequence
NZ_ACOY01000002
6.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ACOY01000003
27.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ACOY01000004
37.3 KB
39 CDS

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whole genome shotgun sequence
NZ_ACOY01000005
30.6 KB
33 CDS

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whole genome shotgun sequence
NZ_ACOY01000006
22.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ACOY01000007
3.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ACOY01000008
23.1 KB
19 CDS

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whole genome shotgun sequence
NZ_ACOY01000009
840 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACOY01000010
27.7 KB
27 CDS

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whole genome shotgun sequence
NZ_ACOY01000011
604 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000012
615 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000013
366.4 KB
358 CDS

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whole genome shotgun sequence
NZ_ACOY01000014
47.9 KB
59 CDS

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whole genome shotgun sequence
NZ_ACOY01000015
54.9 KB
66 CDS

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whole genome shotgun sequence
NZ_ACOY01000016
7.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ACOY01000017
13.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ACOY01000018
837 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACOY01000019
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000020
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000021
26.6 KB
25 CDS

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whole genome shotgun sequence
NZ_ACOY01000022
27.0 KB
25 CDS

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whole genome shotgun sequence
NZ_ACOY01000023
3.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000024
101.0 KB
106 CDS

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whole genome shotgun sequence
NZ_ACOY01000025
18.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ACOY01000026
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACOY01000027
10.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ACOY01000028
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000029
655 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000030
20.4 KB
22 CDS

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whole genome shotgun sequence
NZ_ACOY01000031
9.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ACOY01000032
54.5 KB
46 CDS

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whole genome shotgun sequence
NZ_ACOY01000033
69.6 KB
60 CDS

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whole genome shotgun sequence
NZ_ACOY01000034
624 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000035
914 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACOY01000036
687 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000037
16.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ACOY01000038
25.1 KB
24 CDS

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whole genome shotgun sequence
NZ_ACOY01000039
9.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ACOY01000040
43.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ACOY01000041
28.6 KB
25 CDS

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whole genome shotgun sequence
NZ_ACOY01000042
50.5 KB
46 CDS

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whole genome shotgun sequence
NZ_ACOY01000043
24.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ACOY01000044
16.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ACOY01000045
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACOY01000046
19.1 KB
17 CDS

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whole genome shotgun sequence
NZ_ACOY01000047
24.7 KB
20 CDS

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whole genome shotgun sequence
NZ_ACOY01000048
68.1 KB
23 CDS

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whole genome shotgun sequence
NZ_ACOY01000049
37.4 KB
32 CDS

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whole genome shotgun sequence
NZ_ACOY01000050
851 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000051
27.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ACOY01000052
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACOY01000053
4.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACOY01000054
66.1 KB
69 CDS

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whole genome shotgun sequence
NZ_ACOY01000055
30.0 KB
29 CDS

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whole genome shotgun sequence
NZ_ACOY01000056
16.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ACOY01000057
25.0 KB
27 CDS

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Taxonomy

External Links

Lactobacillus jensenii 269-3

Search Genome

Sequences

PubMed Search for Lactobacillus jensenii 269-3

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