Lactobacillus johnsonii ATCC 33200

BCM

GC Content: 34.5%, Released Date: Feb. 19, 2009 #18169

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACGR01000001
233 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGR01000002
531 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000003
512 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000004
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000005
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000006
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000007
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000008
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000009
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000010
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGR01000011
233 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGR01000012
223 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000013
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGR01000014
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000015
213 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000016
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000017
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000018
240 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000019
236 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000020
56.4 KB
59 CDS

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whole genome shotgun sequence
NZ_ACGR01000021
108.1 KB
131 CDS

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whole genome shotgun sequence
NZ_ACGR01000022
12.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ACGR01000023
86.5 KB
92 CDS

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whole genome shotgun sequence
NZ_ACGR01000024
274.0 KB
267 CDS

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whole genome shotgun sequence
NZ_ACGR01000025
153.7 KB
160 CDS

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whole genome shotgun sequence
NZ_ACGR01000026
9.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ACGR01000027
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ACGR01000028
277 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000029
411 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000030
550 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000031
134.6 KB
138 CDS

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whole genome shotgun sequence
NZ_ACGR01000032
33.5 KB
38 CDS

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whole genome shotgun sequence
NZ_ACGR01000033
16.7 KB
16 CDS

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whole genome shotgun sequence
NZ_ACGR01000034
90.2 KB
89 CDS

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whole genome shotgun sequence
NZ_ACGR01000035
7.2 KB
9 CDS

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whole genome shotgun sequence
NZ_ACGR01000036
152.9 KB
172 CDS

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whole genome shotgun sequence
NZ_ACGR01000037
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000038
243.5 KB
246 CDS

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whole genome shotgun sequence
NZ_ACGR01000039
26.6 KB
23 CDS

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whole genome shotgun sequence
NZ_ACGR01000040
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGR01000041
37.7 KB
53 CDS

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whole genome shotgun sequence
NZ_ACGR01000042
44.7 KB
40 CDS

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whole genome shotgun sequence
NZ_ACGR01000043
135.9 KB
148 CDS

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whole genome shotgun sequence
NZ_ACGR01000044
74.5 KB
97 CDS

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whole genome shotgun sequence
NZ_ACGR01000045
515 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000046
3.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000047
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACGR01000048
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000049
3.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACGR01000050
3.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGR01000051
662 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGR01000052
7.6 KB
7 CDS

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Taxonomy

External Links

Lactobacillus johnsonii ATCC 33200

Search Genome

Sequences

PubMed Search for Lactobacillus johnsonii ATCC 33200

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