Lactobacillus salivarius ATCC 11741

BCM

GC Content: 32.6%, Released Date: Feb. 19, 2009 #18180

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACGT01000001
242.3 KB
249 CDS

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whole genome shotgun sequence
NZ_ACGT01000002
267.8 KB
280 CDS

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whole genome shotgun sequence
NZ_ACGT01000003
38.8 KB
40 CDS

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whole genome shotgun sequence
NZ_ACGT01000004
179.9 KB
175 CDS

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whole genome shotgun sequence
NZ_ACGT01000005
123.4 KB
121 CDS

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whole genome shotgun sequence
NZ_ACGT01000006
65.7 KB
68 CDS

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whole genome shotgun sequence
NZ_ACGT01000007
165.9 KB
174 CDS

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whole genome shotgun sequence
NZ_ACGT01000008
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000009
235 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000010
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000011
228 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000012
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGT01000013
228 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000014
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000015
223 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000016
229 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000017
34.1 KB
41 CDS

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whole genome shotgun sequence
NZ_ACGT01000018
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGT01000019
70.4 KB
68 CDS

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whole genome shotgun sequence
NZ_ACGT01000020
11.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ACGT01000021
589 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000022
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGT01000023
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACGT01000024
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACGT01000025
49.0 KB
50 CDS

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whole genome shotgun sequence
NZ_ACGT01000026
48.4 KB
44 CDS

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whole genome shotgun sequence
NZ_ACGT01000027
442 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000028
70.8 KB
56 CDS

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whole genome shotgun sequence
NZ_ACGT01000029
235 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGT01000030
62.3 KB
73 CDS

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whole genome shotgun sequence
NZ_ACGT01000031
56.4 KB
57 CDS

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whole genome shotgun sequence
NZ_ACGT01000032
30.6 KB
37 CDS

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whole genome shotgun sequence
NZ_ACGT01000033
27.2 KB
34 CDS

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whole genome shotgun sequence
NZ_ACGT01000034
2.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ACGT01000035
8.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACGT01000036
39.2 KB
41 CDS

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whole genome shotgun sequence
NZ_ACGT01000037
24.2 KB
23 CDS

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whole genome shotgun sequence
NZ_ACGT01000038
34.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ACGT01000039
47.1 KB
43 CDS

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whole genome shotgun sequence
NZ_ACGT01000040
43.9 KB
38 CDS

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whole genome shotgun sequence
NZ_ACGT01000041
60.5 KB
54 CDS

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whole genome shotgun sequence
NZ_ACGT01000042
571 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACGT01000043
6.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ACGT01000044
79.3 KB
76 CDS

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whole genome shotgun sequence
NZ_ACGT01000045
40.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ACGT01000046
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGT01000047
709 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGT01000048
604 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000049
319 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000050
359 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000051
237 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000052
492 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000053
603 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGT01000054
655 bytes
2 CDS

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Taxonomy

External Links

Lactobacillus salivarius ATCC 11741

Search Genome

Sequences

PubMed Search for Lactobacillus salivarius ATCC 11741

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